Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 Y_RNA.458-201ENST00000384240 102 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 RNU6-472P-201ENST00000384299 107 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 SNORA46-201ENST00000384762 135 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 SNORA26.3-201ENST00000391119 136 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 SDAD1P3-201ENST00000427380 333 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 SUMO1P4-201ENST00000429430 302 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 AC022018.1-201ENST00000430685 241 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 AL139132.1-201ENST00000431587 344 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 RPS15AP5-201ENST00000436276 388 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 AC012308.1-201ENST00000451232 178 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 YWHAEP4-201ENST00000505390 198 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 SNORA40.15-201ENST00000516884 107 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 Y_RNA.713-201ENST00000517013 96 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.97□□□□□ -1.93
DKK3Q9UBP4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.97□□□□□ -1.93
DKK3Q9UBP4 AC091152.3-201ENST00000604227 325 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 AL450472.1-202ENST00000637286 180 ntBASIC2.97□□□□□ -1.93
DKK3Q9UBP4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
DKK3Q9UBP4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
DKK3Q9UBP4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.97□□□□□ -1.93
DKK3Q9UBP4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
DKK3Q9UBP4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
DKK3Q9UBP4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
DKK3Q9UBP4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
DKK3Q9UBP4 Y_RNA.222-201ENST00000364264 102 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 SNORA9.2-201ENST00000365361 133 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 Y_RNA.518-201ENST00000384552 113 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 RNU6-748P-201ENST00000384648 107 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 RNA5SP213-201ENST00000391031 106 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.96□□□□□ -1.94
DKK3Q9UBP4 PCNPP5-201ENST00000452246 481 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 RNU7-87P-201ENST00000459343 62 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 TOMM22P6-201ENST00000465035 409 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 AC087477.1-201ENST00000465747 340 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 RN7SL633P-201ENST00000488974 297 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 AC025465.3-201ENST00000510570 311 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 AC067942.3-201ENST00000512025 362 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 RNU6-1271P-201ENST00000517049 105 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
DKK3Q9UBP4 HSPE1P4-201ENST00000550617 308 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 AC007375.1-201ENST00000554513 578 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
DKK3Q9UBP4 AL033523.1-201ENST00000605153 153 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 AC130454.1-201ENST00000622948 401 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 U6.104-201ENST00000637979 90 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.96□□□□□ -1.94
DKK3Q9UBP4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
DKK3Q9UBP4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
DKK3Q9UBP4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
DKK3Q9UBP4 Y_RNA.19-201ENST00000362462 99 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 Y_RNA.288-201ENST00000364854 92 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 Y_RNA.396-201ENST00000383949 103 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 Y_RNA.476-201ENST00000384347 108 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 MIR32-201ENST00000384965 70 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 RNU1-139P-201ENST00000391307 165 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 RNU6-130P-201ENST00000411112 103 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 AC096649.2-201ENST00000416186 393 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 PTGES3P4-201ENST00000426243 356 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 USP9YP16-201ENST00000430287 407 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 GPM6BP3-201ENST00000442797 145 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 RPL39P29-201ENST00000447779 157 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 UQCRHP3-201ENST00000451503 251 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 USP9YP23-201ENST00000455085 407 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 U8.22-201ENST00000459141 133 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 RPS29P26-201ENST00000477483 171 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 AC010469.2-201ENST00000496412 480 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 RNU2-53P-201ENST00000516257 147 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.95□□□□□ -1.94
DKK3Q9UBP4 AC021231.3-201ENST00000558497 370 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.95□□□□□ -1.94
DKK3Q9UBP4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.95□□□□□ -1.94
DKK3Q9UBP4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
DKK3Q9UBP4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.95□□□□□ -1.94
DKK3Q9UBP4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
DKK3Q9UBP4 AC002543.1-201ENST00000299783 1954 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 SNORD115-8-201ENST00000363856 82 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 SNORD115-38-201ENST00000365037 82 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 U8.10-201ENST00000384260 133 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 Y_RNA.504-201ENST00000384481 104 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 RNU6-19P-201ENST00000384718 107 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 MIR1302-6-201ENST00000408466 90 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 RNU6-847P-201ENST00000411115 108 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 CYCSP48-201ENST00000417124 323 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 EIF1P2-201ENST00000428233 350 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 AC244670.1-201ENST00000436879 112 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.94□□□□□ -1.94
DKK3Q9UBP4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.94□□□□□ -1.94
DKK3Q9UBP4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.94□□□□□ -1.94
DKK3Q9UBP4 SCGB1D5P-201ENST00000515134 247 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 RN7SKP43-201ENST00000516173 320 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 RNU6-397P-201ENST00000516226 104 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 RNU6-1012P-201ENST00000516606 109 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 RNU6-1198P-201ENST00000516904 67 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 AC023043.3-201ENST00000593113 385 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 U6.92-201ENST00000636464 89 ntBASIC2.94□□□□□ -1.94
DKK3Q9UBP4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 305.8 ms