Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 EIF4A1P12-201ENST00000551910 141 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 AC233702.2-202ENST00000562547 291 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 AC055872.1-201ENST00000570978 278 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 uc_338.1-201ENST00000612113 180 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 AC006001.4-201ENST00000622243 395 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 AC127459.3-201ENST00000624328 466 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 AC110079.1-202ENST00000635213 138 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 IGHVIII-44-202ENST00000636235 289 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 PWAR6-201ENST00000552334 4618 ntBASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.12□□□□□ -1.91
KCMF1Q9P0J7 MIR148B-201ENST00000362252 99 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 RNU1-62P-201ENST00000362599 164 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 U3.9-201ENST00000363823 204 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 RNU6-200P-201ENST00000364743 107 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 SNORA72.2-201ENST00000365028 127 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 Y_RNA.331-201ENST00000365267 102 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 RNU2-14P-201ENST00000411053 191 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 AL390729.2-201ENST00000416137 156 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 AC097463.2-201ENST00000421074 142 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 AC005326.1-201ENST00000429197 123 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 AC074133.1-201ENST00000515696 183 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 RNU2-31P-201ENST00000516954 155 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 AC008749.1-201ENST00000597650 306 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 AC009779.6-201ENST00000603972 165 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 AC037487.3-201ENST00000606668 112 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 AC099778.2-201ENST00000610904 211 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 UCA1.1-201ENST00000620952 75 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 AL359854.1-201ENST00000614203 1594 ntBASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KCMF1Q9P0J7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 Y_RNA.269-201ENST00000364685 89 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 SNORA46.1-201ENST00000391069 153 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 RNU1-101P-201ENST00000391171 127 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 RNA5SP229-201ENST00000410809 99 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 RPL23AP83-201ENST00000434984 473 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 AC006445.1-201ENST00000491925 405 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 MRPS36P2-201ENST00000512569 299 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 RNU4-71P-201ENST00000516258 113 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 HSPE1P18-201ENST00000517602 280 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 MIR5195-201ENST00000583555 115 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 MIR4765-201ENST00000585007 77 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 AC002064.3-201ENST00000623448 346 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 SNORA50A-202ENST00000629536 136 ntBASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KCMF1Q9P0J7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AC069528.2-201ENST00000624849 1991 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 Y_RNA.44-201ENST00000362676 108 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 RNU6-326P-201ENST00000365480 107 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 SNORA18.2-201ENST00000383865 132 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 MIR491-201ENST00000384877 84 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 ELOCP21-201ENST00000412558 336 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 RPL23AP36-201ENST00000413895 458 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 RAB28P5-201ENST00000427490 651 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AC009969.1-201ENST00000438726 172 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AC004386.2-201ENST00000441858 148 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AC006483.1-201ENST00000487308 313 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 RAC1P5-201ENST00000512182 576 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 SCARNA17.1-201ENST00000516211 143 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 SCARNA17.2-201ENST00000516334 143 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 DEFB131C-201ENST00000528817 165 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AC027176.1-201ENST00000560204 514 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AC026470.2-201ENST00000561492 181 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 MIR4643-201ENST00000577473 78 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AC011471.1-201ENST00000585766 187 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AL670379.2-201ENST00000604983 252 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 SCARNA17.4-201ENST00000614296 143 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AC005562.2-201ENST00000618264 111 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AC093908.1-201ENST00000623125 8092 ntBASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
KCMF1Q9P0J7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
KCMF1Q9P0J7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 AC026241.1-201ENST00000517873 2142 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 SNORA25.1-201ENST00000362326 128 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms