Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.57□□□□□ -1.84
GSX1Q9H4S2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GSX1Q9H4S2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GSX1Q9H4S2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.56□□□□□ -1.84
GSX1Q9H4S2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
GSX1Q9H4S2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
GSX1Q9H4S2 RNU1-57P-201ENST00000384491 166 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 RNU6-768P-201ENST00000384683 107 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 SNORA48.5-201ENST00000391143 135 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 RBMY2UP-201ENST00000453474 324 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 RPL23AP94-201ENST00000512518 302 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 AC099522.1-202ENST00000514718 367 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.56□□□□□ -1.84
GSX1Q9H4S2 AC100770.1-201ENST00000532310 322 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 AP000867.2-201ENST00000532468 320 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
GSX1Q9H4S2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GSX1Q9H4S2 AC005000.2-201ENST00000605468 310 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 MIR6891-201ENST00000618788 93 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
GSX1Q9H4S2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 AC068647.2-201ENST00000637380 353 ntBASIC3.56□□□□□ -1.84
GSX1Q9H4S2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
GSX1Q9H4S2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GSX1Q9H4S2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
GSX1Q9H4S2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GSX1Q9H4S2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 ZNF702P-202ENST00000434269 1966 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 RNU1-14P-201ENST00000362759 152 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 RNA5SP322-201ENST00000363617 119 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 RNU1-63P-201ENST00000383902 164 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 MIR518C-201ENST00000384822 101 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 SNORA79-201ENST00000408376 140 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 RNU6-383P-201ENST00000410864 94 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 ARF4P2-201ENST00000430209 526 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 TBCAP1-201ENST00000436520 327 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 HMGN2P16-201ENST00000456802 261 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 RNU7-197P-201ENST00000458836 62 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 RNU7-23P-201ENST00000459465 62 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 AC092991.1-201ENST00000477176 376 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 AC117454.1-201ENST00000491120 168 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 RN7SKP179-201ENST00000516126 217 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 RNU6-561P-201ENST00000516222 102 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 AC026403.1-201ENST00000518938 295 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 U7.8-201ENST00000619968 63 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 AC091905.2-201ENST00000623143 306 ntBASIC3.55□□□□□ -1.84
GSX1Q9H4S2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
GSX1Q9H4S2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 AL513302.2-201ENST00000562313 1842 ntBASIC3.54□□□□□ -1.84
GSX1Q9H4S2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 U8.7-201ENST00000364940 136 ntBASIC3.54□□□□□ -1.84
GSX1Q9H4S2 SNORA67.2-201ENST00000384300 149 ntBASIC3.54□□□□□ -1.84
GSX1Q9H4S2 RNU6-588P-201ENST00000410281 105 ntBASIC3.54□□□□□ -1.84
GSX1Q9H4S2 ABCF2P2-201ENST00000450549 296 ntBASIC3.54□□□□□ -1.84
GSX1Q9H4S2 RPS4XP2-201ENST00000458402 793 ntBASIC3.54□□□□□ -1.84
GSX1Q9H4S2 RPL36AP48-201ENST00000485521 314 ntBASIC3.54□□□□□ -1.84
GSX1Q9H4S2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 MIR5195-201ENST00000583555 115 ntBASIC3.54□□□□□ -1.84
GSX1Q9H4S2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 RPL17P51-201ENST00000605218 238 ntBASIC3.54□□□□□ -1.84
GSX1Q9H4S2 U7.2-201ENST00000607576 63 ntBASIC3.54□□□□□ -1.84
GSX1Q9H4S2 MIR548AY-201ENST00000617669 107 ntBASIC3.54□□□□□ -1.84
GSX1Q9H4S2 AP001340.1-201ENST00000624405 217 ntBASIC3.54□□□□□ -1.84
GSX1Q9H4S2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
GSX1Q9H4S2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
GSX1Q9H4S2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.53□□□□□ -1.84
GSX1Q9H4S2 AP002088.1-201ENST00000382740 395 ntBASIC3.53□□□□□ -1.84
GSX1Q9H4S2 Y_RNA.393-201ENST00000383936 102 ntBASIC3.53□□□□□ -1.84
GSX1Q9H4S2 RNU6-750P-201ENST00000390946 107 ntBASIC3.53□□□□□ -1.84
GSX1Q9H4S2 SNORA12-201ENST00000391162 147 ntBASIC3.53□□□□□ -1.84
GSX1Q9H4S2 SNORA36B-201ENST00000410438 131 ntBASIC3.53□□□□□ -1.84
GSX1Q9H4S2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.53□□□□□ -1.84
GSX1Q9H4S2 AL157831.1-201ENST00000426134 473 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms