Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC3.13□□□□□ -1.91
KRTAP3-3Q9BYR6 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR424-201ENST00000362227 98 ntBASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR548C-201ENST00000384815 97 ntBASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 SNORD93-201ENST00000408813 74 ntBASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 AL121578.2-201ENST00000448797 447 ntBASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 RNU7-62P-201ENST00000458856 62 ntBASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 RN7SL352P-201ENST00000466002 277 ntBASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 RNU6-287P-201ENST00000516230 98 ntBASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR4709-201ENST00000577272 72 ntBASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 AC010300.1-201ENST00000600671 5134 ntBASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 AL450345.1-202ENST00000605741 3881 ntBASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP3-3Q9BYR6 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 RNU6-403P-201ENST00000363163 104 ntBASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR517B-201ENST00000385102 67 ntBASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 AC000089.1-201ENST00000424559 801 ntBASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 snoU13.22-201ENST00000459428 104 ntBASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 RNU1-45P-201ENST00000517191 141 ntBASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 SNORA40.16-201ENST00000517238 121 ntBASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 GNG2-203ENST00000553432 577 ntTSL 4 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 AC007448.1-201ENST00000582714 234 ntBASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 AC006115.2-201ENST00000596823 202 ntBASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 ZNF355P-201ENST00000427301 3216 ntBASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRTAP3-3Q9BYR6 AC104581.5-201ENST00000624171 7141 ntBASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 AP003175.1-201ENST00000641383 6658 ntBASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 RNA5SP140-201ENST00000364524 92 ntBASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 RNU6-396P-201ENST00000365369 105 ntBASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 MIR187-201ENST00000385062 109 ntBASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 COX6B1P2-201ENST00000489624 230 ntBASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 AC008953.1-201ENST00000497334 318 ntBASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 RN7SL426P-201ENST00000579106 295 ntBASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 AC027229.1-201ENST00000583887 253 ntBASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 U1.41-201ENST00000617626 165 ntBASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 AL355480.4-201ENST00000626823 69 ntBASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 AC092435.3-201ENST00000565538 3654 ntBASIC3.1□□□□□ -1.91
KRTAP3-3Q9BYR6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms