Protein–RNA interactions for Protein: Q9BYD3

MRPL4, 39S ribosomal protein L4, mitochondrial, humanhuman

Known RBP Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL4Q9BYD3 MIR3186-201ENST00000577404 85 ntBASIC3.32□□□□□ -1.88
MRPL4Q9BYD3 AC006006.1-201ENST00000603082 144 ntBASIC3.32□□□□□ -1.88
MRPL4Q9BYD3 MTND5P35-201ENST00000557537 1720 ntBASIC3.32□□□□□ -1.88
MRPL4Q9BYD3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 AC073325.2-201ENST00000339545 159 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 RNU6-727P-201ENST00000363592 107 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 SNORA18.2-201ENST00000383865 132 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 Y_RNA.396-201ENST00000383949 103 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 RNU2-20P-201ENST00000410425 191 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 RN7SL20P-201ENST00000488827 297 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 SNORA40.9-201ENST00000515895 93 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 AC105245.1-201ENST00000581934 244 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 MIR5006-201ENST00000583027 110 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 AC010620.2-201ENST00000600135 313 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 MZT1P2-201ENST00000604387 248 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 AC069294.1-201ENST00000608397 350 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 TCL6_2.1-201ENST00000615162 119 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 AC092628.2-201ENST00000622492 339 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 AC000403.1-201ENST00000613696 3585 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 LINC02555-201ENST00000563933 1951 ntBASIC3.31□□□□□ -1.88
MRPL4Q9BYD3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 Y_RNA.288-201ENST00000364854 92 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 MIR1289-1-201ENST00000408836 144 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 Y_RNA.597-201ENST00000410463 100 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 Y_RNA.618-201ENST00000410949 107 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 Z92545.1-201ENST00000411782 234 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 MICF-203ENST00000432679 129 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 AC004386.2-201ENST00000441858 148 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 AC091179.1-201ENST00000461606 579 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 AC117440.1-201ENST00000474107 571 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 CKS1BP2-201ENST00000497342 240 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 RNU6-408P-201ENST00000515910 100 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 CYCSP23-201ENST00000519781 313 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 AC022080.3-201ENST00000544433 482 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 MIR5047-201ENST00000579212 100 ntBASIC3.3□□□□□ -1.88
MRPL4Q9BYD3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 RNU1-62P-201ENST00000362599 164 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 Y_RNA.376-201ENST00000365638 108 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 RNU6-937P-201ENST00000384325 106 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 AL033519.2-201ENST00000403958 392 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 U6atac.2-201ENST00000408644 118 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 RNA5SP274-201ENST00000410484 108 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 RNU6-121P-201ENST00000410525 99 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 RPL21P38-201ENST00000418090 167 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 IFNA11P-201ENST00000446352 526 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 RN7SL330P-201ENST00000469709 307 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 AC091179.3-201ENST00000474761 144 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 AC025465.3-201ENST00000510570 311 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 RNU6-586P-201ENST00000517265 104 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 RRN3P3-201ENST00000549207 578 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 MIR4300-201ENST00000581016 96 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 AC080128.1-201ENST00000474389 1917 ntBASIC3.29□□□□□ -1.88
MRPL4Q9BYD3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 RNU6-805P-201ENST00000365643 106 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 SNORA48.8-201ENST00000391324 134 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AC096920.1-201ENST00000423991 241 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AC022018.1-201ENST00000430685 241 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 RPL23AP58-201ENST00000440453 469 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AC098869.1-201ENST00000481627 292 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AC006483.1-201ENST00000487308 313 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AC023141.11-201ENST00000508864 202 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 RNU2-44P-201ENST00000516795 194 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AC136932.1-201ENST00000574771 208 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 MIR3671-201ENST00000580455 88 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AC093732.2-201ENST00000607950 274 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 AC007318.2-201ENST00000620999 243 ntBASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.28□□□□□ -1.88
MRPL4Q9BYD3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MRPL4Q9BYD3 RNU6-525P-201ENST00000363685 104 ntBASIC3.27□□□□□ -1.89
MRPL4Q9BYD3 AC007395.1-201ENST00000451333 677 ntBASIC3.27□□□□□ -1.89
MRPL4Q9BYD3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 298.9 ms