Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RNA5SP89-201ENST00000410300 108 ntBASIC4.5□□□□□ -1.69
PHOX2BQ99453 RNA5SP511-201ENST00000410487 115 ntBASIC4.5□□□□□ -1.69
PHOX2BQ99453 RNU6-498P-201ENST00000459468 107 ntBASIC4.5□□□□□ -1.69
PHOX2BQ99453 SNORA18.4-201ENST00000516440 124 ntBASIC4.5□□□□□ -1.69
PHOX2BQ99453 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.5□□□□□ -1.69
PHOX2BQ99453 AC015720.1-201ENST00000565251 277 ntBASIC4.5□□□□□ -1.69
PHOX2BQ99453 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PHOX2BQ99453 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
PHOX2BQ99453 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.5□□□□□ -1.69
PHOX2BQ99453 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PHOX2BQ99453 AL355596.1-201ENST00000565399 3996 ntBASIC4.5□□□□□ -1.69
PHOX2BQ99453 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PHOX2BQ99453 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHOX2BQ99453 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHOX2BQ99453 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.49□□□□□ -1.69
PHOX2BQ99453 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.49□□□□□ -1.69
PHOX2BQ99453 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHOX2BQ99453 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHOX2BQ99453 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PHOX2BQ99453 MIR331-201ENST00000362302 94 ntBASIC4.49□□□□□ -1.69
PHOX2BQ99453 RNU6-1240P-201ENST00000365155 104 ntBASIC4.49□□□□□ -1.69
PHOX2BQ99453 RNU6-1336P-201ENST00000383886 109 ntBASIC4.49□□□□□ -1.69
PHOX2BQ99453 MIR767-201ENST00000390228 109 ntBASIC4.49□□□□□ -1.69
PHOX2BQ99453 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.49□□□□□ -1.69
PHOX2BQ99453 Z98742.2-201ENST00000431564 187 ntBASIC4.49□□□□□ -1.69
PHOX2BQ99453 ABCF2P2-201ENST00000450549 296 ntBASIC4.49□□□□□ -1.69
PHOX2BQ99453 AP001486.1-201ENST00000463339 476 ntBASIC4.49□□□□□ -1.69
PHOX2BQ99453 RN7SKP19-201ENST00000516016 252 ntBASIC4.49□□□□□ -1.69
PHOX2BQ99453 AC025647.1-201ENST00000517879 253 ntBASIC4.49□□□□□ -1.69
PHOX2BQ99453 MIR4679-1-201ENST00000637619 75 ntBASIC4.49□□□□□ -1.69
PHOX2BQ99453 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
PHOX2BQ99453 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PHOX2BQ99453 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PHOX2BQ99453 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PHOX2BQ99453 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHOX2BQ99453 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHOX2BQ99453 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PHOX2BQ99453 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.48□□□□□ -1.69
PHOX2BQ99453 RNU6-486P-201ENST00000363116 107 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 RNU6-117P-201ENST00000365415 107 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 RNU6-32P-201ENST00000383948 107 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 RNU6-13P-201ENST00000384248 107 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 RNU6-12P-201ENST00000384604 107 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 RNU6-41P-201ENST00000384741 107 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 RNA5SP104-201ENST00000410989 118 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.48□□□□□ -1.69
PHOX2BQ99453 AC008155.2-201ENST00000464337 397 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 RPL27AP5-201ENST00000469428 449 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 AL592156.1-201ENST00000508758 304 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 AC027419.1-201ENST00000522976 328 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.48□□□□□ -1.69
PHOX2BQ99453 TVP23BP1-201ENST00000557500 617 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 RPL23AP91-201ENST00000569211 455 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 SNORA74C-1-201ENST00000580726 201 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 MIR5195-201ENST00000583555 115 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 AC113403.1-201ENST00000604910 193 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.48□□□□□ -1.69
PHOX2BQ99453 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHOX2BQ99453 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PHOX2BQ99453 AC058791.1-201ENST00000608412 3198 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHOX2BQ99453 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PHOX2BQ99453 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHOX2BQ99453 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
PHOX2BQ99453 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.47□□□□□ -1.69
PHOX2BQ99453 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHOX2BQ99453 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PHOX2BQ99453 MIR624-201ENST00000385217 97 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 SNORD96B-201ENST00000386148 79 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 RNA5SP127-201ENST00000411051 133 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 HMGN2P31-201ENST00000432430 273 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 SNORA71B-202ENST00000439232 272 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 RPS27P22-201ENST00000478056 241 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 RPS29P21-201ENST00000496272 170 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 SNORA31.1-201ENST00000515993 133 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 SNORA31.5-201ENST00000516190 133 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 RNU6-412P-201ENST00000516434 106 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 RNU6-63P-201ENST00000516690 95 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 RNU1-104P-201ENST00000517280 175 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 IFITM8P-201ENST00000522529 394 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 CYCSP40-201ENST00000575927 294 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 LINC00901.1-201ENST00000617252 152 ntBASIC4.47□□□□□ -1.69
PHOX2BQ99453 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.47□□□□□ -1.69
PHOX2BQ99453 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.47□□□□□ -1.69
PHOX2BQ99453 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PHOX2BQ99453 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.47□□□□□ -1.69
PHOX2BQ99453 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
PHOX2BQ99453 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PHOX2BQ99453 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.47□□□□□ -1.69
PHOX2BQ99453 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PHOX2BQ99453 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PHOX2BQ99453 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PHOX2BQ99453 Y_RNA.35-201ENST00000362601 101 ntBASIC4.46□□□□□ -1.7
PHOX2BQ99453 RNU6-1138P-201ENST00000365359 106 ntBASIC4.46□□□□□ -1.7
PHOX2BQ99453 RNU6-1083P-201ENST00000384022 107 ntBASIC4.46□□□□□ -1.7
PHOX2BQ99453 Y_RNA.500-201ENST00000384466 111 ntBASIC4.46□□□□□ -1.7
PHOX2BQ99453 SDHCP2-201ENST00000398565 501 ntBASIC4.46□□□□□ -1.7
PHOX2BQ99453 Y_RNA.630-201ENST00000411370 108 ntBASIC4.46□□□□□ -1.7
PHOX2BQ99453 RPL23AP52-201ENST00000439311 478 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms