Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 RNU7-26P-201ENST00000458980 63 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
NPIPB3Q92617 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.45□□□□□ -2.02
NPIPB3Q92617 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.45□□□□□ -2.02
NPIPB3Q92617 RNU1-117P-201ENST00000517041 158 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 AC023632.4-201ENST00000517783 191 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 RRN3P3-201ENST00000549207 578 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.45□□□□□ -2.02
NPIPB3Q92617 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.45□□□□□ -2.02
NPIPB3Q92617 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.45□□□□□ -2.02
NPIPB3Q92617 AC006133.1-201ENST00000617106 264 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 MIR1248-201ENST00000629190 106 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 AC012442.3-202ENST00000636742 206 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
NPIPB3Q92617 AC108206.1-201ENST00000570186 4159 ntBASIC2.45□□□□□ -2.02
NPIPB3Q92617 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NPIPB3Q92617 AL161912.2-201ENST00000565707 3007 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 SNORA38-201ENST00000363946 132 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 Y_RNA.276-201ENST00000364732 109 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 SNORD31B-201ENST00000364977 69 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 Y_RNA.415-201ENST00000384012 112 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 MIR490-201ENST00000384865 128 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 MIR586-201ENST00000385035 97 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 RN7SKP58-201ENST00000411010 305 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.44□□□□□ -2.02
NPIPB3Q92617 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.44□□□□□ -2.02
NPIPB3Q92617 RN7SL542P-201ENST00000467147 294 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 AC018868.1-201ENST00000491307 315 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 MRPS35P2-201ENST00000508242 191 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 RN7SKP43-201ENST00000516173 320 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 RNA5SP490-201ENST00000517141 136 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 RNU6-667P-201ENST00000517186 102 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.44□□□□□ -2.02
NPIPB3Q92617 AC233702.2-202ENST00000562547 291 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 RAC1P9-201ENST00000604990 392 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 AL162730.1-201ENST00000605734 292 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 AL357075.2-201ENST00000614906 189 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 AC011476.5-201ENST00000615594 130 ntBASIC2.44□□□□□ -2.02
NPIPB3Q92617 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NPIPB3Q92617 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NPIPB3Q92617 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.44□□□□□ -2.02
NPIPB3Q92617 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NPIPB3Q92617 RNU6-743P-201ENST00000364151 106 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 Y_RNA.210-201ENST00000364161 110 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 RNU6-438P-201ENST00000365561 103 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 AL356057.3-201ENST00000402607 340 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 AL031121.1-201ENST00000406553 254 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 RNU2-48P-201ENST00000410694 191 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.43□□□□□ -2.02
NPIPB3Q92617 AC244505.4-201ENST00000434905 287 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 SSXP5-201ENST00000443473 287 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 AC074290.1-201ENST00000448883 135 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.43□□□□□ -2.02
NPIPB3Q92617 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 AC114982.1-201ENST00000469402 321 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 AC010655.3-201ENST00000478818 450 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 RPL21P129-201ENST00000491732 478 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 AC110794.1-201ENST00000505816 425 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 ATP5EP1-201ENST00000510257 156 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 RNU6-1046P-201ENST00000516538 107 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 SNORA40.15-201ENST00000516884 107 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 AL117187.1-201ENST00000555482 181 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 MIR4753-201ENST00000585119 83 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.43□□□□□ -2.02
NPIPB3Q92617 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
NPIPB3Q92617 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
NPIPB3Q92617 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NPIPB3Q92617 RNU6-545P-201ENST00000362681 104 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 RNU1-33P-201ENST00000364249 162 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 RNU6-1305P-201ENST00000364353 104 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 SNORA67.2-201ENST00000384300 149 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 Y_RNA.498-201ENST00000384460 102 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 SNORD15B-201ENST00000384714 146 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 AL079342.1-201ENST00000401460 267 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 AL357075.1-201ENST00000404107 726 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 MIR1283-1-201ENST00000408494 87 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 MIR548F4-201ENST00000408515 105 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 RNA5SP504-201ENST00000410676 117 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.42□□□□□ -2.02
NPIPB3Q92617 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.42□□□□□ -2.02
NPIPB3Q92617 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.42□□□□□ -2.02
NPIPB3Q92617 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.42□□□□□ -2.02
NPIPB3Q92617 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NPIPB3Q92617 HMGN2P18-201ENST00000450680 270 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 NDUFB4P10-201ENST00000452541 359 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 RNU6-625P-201ENST00000459412 107 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 RPL26P26-201ENST00000480251 434 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 RN7SL20P-201ENST00000488827 297 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 RN7SL633P-201ENST00000488974 297 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 SLC25A15P5-201ENST00000508033 253 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 RNU6-408P-201ENST00000515910 100 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 RNU6-397P-201ENST00000516226 104 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 AC018448.1-201ENST00000552843 316 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.42□□□□□ -2.02
NPIPB3Q92617 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.42□□□□□ -2.02
NPIPB3Q92617 PRR13P7-201ENST00000605538 430 ntBASIC2.42□□□□□ -2.02
NPIPB3Q92617 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.42□□□□□ -2.02
NPIPB3Q92617 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms