Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 UBL5P4-201ENST00000562584 236 ntBASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 MIR3923-201ENST00000579521 83 ntBASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 AC090115.4-201ENST00000609970 188 ntBASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.06□□□□□ -1.92
CCHCR1Q8TD31 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 AL355596.1-201ENST00000565399 3996 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 Y_RNA.26-201ENST00000362539 101 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 RNU4-15P-201ENST00000362613 141 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 RNU6-655P-201ENST00000362858 107 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 RNU6-1083P-201ENST00000384022 107 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 SNORD78.2-201ENST00000391076 69 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 AC097463.2-201ENST00000421074 142 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 Z98742.2-201ENST00000431564 187 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 RPS3P1-201ENST00000456781 192 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 RPL31P41-201ENST00000477967 372 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 AC025465.3-201ENST00000510570 311 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 RAC1P5-201ENST00000512182 576 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 MRPS36P2-201ENST00000512569 299 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 AC008885.1-201ENST00000514930 301 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 SCARNA17.1-201ENST00000516211 143 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 RNU6-397P-201ENST00000516226 104 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 SCARNA17.2-201ENST00000516334 143 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 RN7SKP49-201ENST00000516675 260 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 Y_RNA.713-201ENST00000517013 96 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 AL356575.1-201ENST00000603008 283 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 SCARNA17.4-201ENST00000614296 143 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 AL162274.2-201ENST00000614406 332 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 AC240442.1-201ENST00000616055 283 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 AC005296.1-201ENST00000616145 209 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 AC130454.1-201ENST00000622948 401 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 BX322639.1-202ENST00000423987 2213 ntBASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.05□□□□□ -1.92
CCHCR1Q8TD31 Y_RNA.222-201ENST00000364264 102 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 RNU6-879P-201ENST00000364328 108 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 RNU6-806P-201ENST00000365147 105 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 SNORD21-201ENST00000383953 95 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 RNU1-109P-201ENST00000383960 147 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 MRPL35P1-201ENST00000404272 572 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 AC022018.1-201ENST00000430685 241 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 SEM1P1-201ENST00000506694 209 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 Y_RNA.668-201ENST00000516233 93 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 RNU2-53P-201ENST00000516257 147 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 RNY3P15-201ENST00000516297 97 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 SNORA40.15-201ENST00000516884 107 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 AC004486.1-201ENST00000546846 233 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 MIR5695-201ENST00000579717 85 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 MIR3670-2-201ENST00000582974 65 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 MIR3670-1-201ENST00000584160 65 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 MIR3670-3-201ENST00000584855 65 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 AC006006.1-201ENST00000603082 144 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 AL161756.2-201ENST00000604597 246 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 MIR3670-4-201ENST00000612260 65 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 PCGEM1.1-201ENST00000613431 131 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CCHCR1Q8TD31 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 OR56A5-201ENST00000340110 738 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 Y_RNA.19-201ENST00000362462 99 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 RNA5SP361-201ENST00000362686 118 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 RNU1-35P-201ENST00000362782 153 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 Y_RNA.64-201ENST00000362845 102 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 Y_RNA.105-201ENST00000363182 111 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 RNU6-280P-201ENST00000364145 104 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 RNU6-1180P-201ENST00000364935 107 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 SNORA9.2-201ENST00000365361 133 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 Y_RNA.439-201ENST00000384119 94 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 RNU6-1145P-201ENST00000384246 107 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 RNU6-472P-201ENST00000384299 107 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 RNU6-378P-201ENST00000384324 107 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 RNU6-505P-201ENST00000384427 107 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 MIR329-1-201ENST00000385028 80 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 MIR208B-201ENST00000401172 77 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 AL513477.1-202ENST00000417061 214 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 EIF4EP4-201ENST00000424916 578 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 AC112220.1-201ENST00000434628 355 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 LINC01399-202ENST00000458450 244 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 RN7SL297P-201ENST00000483161 293 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 RNA5SP341-201ENST00000516261 117 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 AC093023.1-201ENST00000547375 507 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 MIR4659A-201ENST00000580269 81 ntBASIC3.03□□□□□ -1.92
CCHCR1Q8TD31 MIR4325-201ENST00000583049 90 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms