Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.2□□□□□ -1.74
NPAS3Q8IXF0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPAS3Q8IXF0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPAS3Q8IXF0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPAS3Q8IXF0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPAS3Q8IXF0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
NPAS3Q8IXF0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPAS3Q8IXF0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.2□□□□□ -1.74
NPAS3Q8IXF0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 RNU1-15P-201ENST00000353977 144 ntBASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 RNY3P2-201ENST00000362918 102 ntBASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 Y_RNA.198-201ENST00000364013 98 ntBASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 MIR30B-201ENST00000384850 88 ntBASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 EI24P2-201ENST00000397776 1076 ntBASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 AC093578.1-201ENST00000415219 368 ntBASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 Z75741.1-201ENST00000446793 314 ntBASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 RPL23AP67-201ENST00000465341 474 ntBASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 RN7SL323P-201ENST00000494712 295 ntBASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 CYCSP30-201ENST00000546447 172 ntBASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
NPAS3Q8IXF0 AC073073.2-201ENST00000609827 2578 ntBASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 AL159152.1-201ENST00000635019 2587 ntBASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 AC010329.2-201ENST00000595195 2737 ntBASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 RNU6-1240P-201ENST00000365155 104 ntBASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 Y_RNA.333-201ENST00000365274 102 ntBASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 SNORA4.2-201ENST00000365313 147 ntBASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 RNU6-402P-201ENST00000410678 103 ntBASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 AC099548.1-201ENST00000421443 426 ntBASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 SCARNA23-201ENST00000516060 130 ntBASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 RNU6-267P-201ENST00000516714 103 ntBASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 DEFB131E-201ENST00000532329 154 ntBASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPAS3Q8IXF0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 RNA5SP119-201ENST00000362715 117 ntBASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 SNORD35B-201ENST00000363660 87 ntBASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 Y_RNA.344-201ENST00000365381 112 ntBASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 RNU6-1323P-201ENST00000384025 107 ntBASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 SNORA70E-201ENST00000384492 135 ntBASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 U8.11-201ENST00000384699 133 ntBASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 U8.12-201ENST00000384701 133 ntBASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 U8.18-201ENST00000459285 133 ntBASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 AC080013.2-201ENST00000460866 323 ntBASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 RNU6-344P-201ENST00000516635 111 ntBASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 RNU7-143P-201ENST00000516781 65 ntBASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 AC097639.2-201ENST00000603159 172 ntBASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NPAS3Q8IXF0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 ADAM3A-203ENST00000461344 2157 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 Y_RNA.213-201ENST00000364178 111 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 RNU6-140P-201ENST00000384566 108 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 MIR7-3-201ENST00000384898 110 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 RNU6-240P-201ENST00000516098 97 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 RNA5SP179-201ENST00000517284 121 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 AC026403.1-201ENST00000518938 295 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 AC007751.1-201ENST00000529260 376 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 YPEL5P3-201ENST00000547227 352 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 AC087499.8-201ENST00000578406 226 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 AC005972.2-201ENST00000604690 348 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 U7.3-201ENST00000616123 62 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 uc_338.4-201ENST00000616635 176 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 AC005562.2-201ENST00000618264 111 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NPAS3Q8IXF0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms