Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 SNORA51.4-201ENST00000364993 124 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 RNU6-1027P-201ENST00000383998 107 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 RNU6-763P-201ENST00000390865 106 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 AL117339.2-201ENST00000430475 180 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 RPS29P31-201ENST00000446147 164 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 HMGN2P9-201ENST00000476875 229 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 AC083906.5-201ENST00000503722 328 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 RNU6-406P-201ENST00000516470 107 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 RN7SKP83-201ENST00000516512 178 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 RNU7-143P-201ENST00000516781 65 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 MIR3133-201ENST00000583157 78 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 AL591424.2-201ENST00000617023 128 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 U6.115-201ENST00000636045 103 ntBASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 RNU6-1274P-201ENST00000384557 107 ntBASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 GOT2P5-201ENST00000433995 546 ntBASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 AC083863.1-201ENST00000438811 231 ntBASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 RNU7-14P-201ENST00000459331 62 ntBASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 AC146507.2-201ENST00000460608 476 ntBASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 MIR449C-201ENST00000516047 92 ntBASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 RNU6-1219P-201ENST00000516143 112 ntBASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 AC136628.3-201ENST00000521868 290 ntBASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 AC107294.3-201ENST00000609211 526 ntBASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 RMST_8.1-201ENST00000610287 165 ntBASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 AL078604.3-201ENST00000615580 211 ntBASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.37□□□□□ -1.87
NLRC3Q7RTR2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 RNU6-944P-201ENST00000364023 107 ntBASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 RNA5SP97-201ENST00000365006 84 ntBASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 MIR300-201ENST00000401138 83 ntBASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 RNU6-586P-201ENST00000517265 104 ntBASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 MRPS18CP4-201ENST00000535821 231 ntBASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 MIR6868-201ENST00000611215 58 ntBASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 MIR6500-201ENST00000622700 86 ntBASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 AL049781.1-201ENST00000623195 3585 ntBASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 CEP170P1-201ENST00000502249 4587 ntBASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NLRC3Q7RTR2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 RNU1-72P-201ENST00000362976 153 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 RNU6-801P-201ENST00000364087 105 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 RNU6-187P-201ENST00000384139 106 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 Y_RNA.506-201ENST00000384494 102 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 RNU6-125P-201ENST00000384505 107 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 AL357075.1-201ENST00000404107 726 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 MIR1283-1-201ENST00000408494 87 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 MIR1185-2-201ENST00000408687 86 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 RPL30P4-201ENST00000429309 333 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 AL135790.2-201ENST00000437701 267 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 AC074290.1-201ENST00000448883 135 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 U8.19-201ENST00000459095 133 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 AC091021.1-201ENST00000468051 388 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 RPS29P2-201ENST00000479278 136 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 SNORA70.12-201ENST00000516084 153 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 MIR4753-201ENST00000585119 83 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 AL713866.2-201ENST00000603579 219 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 RNA5SP196-201ENST00000625967 102 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 AC021753.1-201ENST00000635724 168 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 AC010329.5-201ENST00000623497 2174 ntBASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NLRC3Q7RTR2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 MIR372-201ENST00000362225 67 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 Y_RNA.287-201ENST00000364853 94 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 RNA5SP479-201ENST00000364858 117 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 RNU6-234P-201ENST00000365229 104 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 Y_RNA.361-201ENST00000365515 120 ntBASIC3.34□□□□□ -1.87
NLRC3Q7RTR2 RNU4-17P-201ENST00000365598 141 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms