Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.81□□□□□ -1.64
VARS2Q5ST30 AL592182.3-201ENST00000642132 3304 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VARS2Q5ST30 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VARS2Q5ST30 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.8□□□□□ -1.64
VARS2Q5ST30 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.8□□□□□ -1.64
VARS2Q5ST30 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VARS2Q5ST30 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VARS2Q5ST30 RNU4-67P-201ENST00000364569 141 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 Y_RNA.340-201ENST00000365330 92 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 SNORA70.4-201ENST00000365509 134 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 AC011998.1-201ENST00000433403 117 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.8□□□□□ -1.64
VARS2Q5ST30 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.8□□□□□ -1.64
VARS2Q5ST30 RNU6-221P-201ENST00000459541 99 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 RN7SL303P-201ENST00000469773 251 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 SNORA67.7-201ENST00000516664 135 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 AC015912.2-201ENST00000571053 181 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 MIR3683-201ENST00000580847 82 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 RPS15AP11-201ENST00000594193 385 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 Y_RNA.773-201ENST00000607168 90 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.8□□□□□ -1.64
VARS2Q5ST30 AC114781.5-201ENST00000615297 108 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 AC006435.5-201ENST00000624486 112 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 MIR203B-201ENST00000636080 86 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VARS2Q5ST30 SALL4P2-201ENST00000423288 2910 ntBASIC4.8□□□□□ -1.64
VARS2Q5ST30 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VARS2Q5ST30 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VARS2Q5ST30 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VARS2Q5ST30 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VARS2Q5ST30 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
VARS2Q5ST30 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.8□□□□□ -1.64
VARS2Q5ST30 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.79□□□□□ -1.64
VARS2Q5ST30 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VARS2Q5ST30 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VARS2Q5ST30 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
VARS2Q5ST30 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VARS2Q5ST30 SNORD58A-201ENST00000383875 65 ntBASIC4.79□□□□□ -1.64
VARS2Q5ST30 Y_RNA.430-201ENST00000384081 110 ntBASIC4.79□□□□□ -1.64
VARS2Q5ST30 SNORD14D-201ENST00000384390 87 ntBASIC4.79□□□□□ -1.64
VARS2Q5ST30 SNORA1.3-201ENST00000384676 136 ntBASIC4.79□□□□□ -1.64
VARS2Q5ST30 RNU2-49P-201ENST00000410666 184 ntBASIC4.79□□□□□ -1.64
VARS2Q5ST30 RPS3P1-201ENST00000456781 192 ntBASIC4.79□□□□□ -1.64
VARS2Q5ST30 RNU1-131P-201ENST00000458943 161 ntBASIC4.79□□□□□ -1.64
VARS2Q5ST30 RN7SL98P-201ENST00000462271 300 ntBASIC4.79□□□□□ -1.64
VARS2Q5ST30 AC108145.1-201ENST00000503770 153 ntBASIC4.79□□□□□ -1.64
VARS2Q5ST30 HSPE1P18-201ENST00000517602 280 ntBASIC4.79□□□□□ -1.64
VARS2Q5ST30 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.79□□□□□ -1.64
VARS2Q5ST30 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.79□□□□□ -1.64
VARS2Q5ST30 AC091979.2-201ENST00000607514 214 ntBASIC4.79□□□□□ -1.64
VARS2Q5ST30 LINC00901.1-201ENST00000617252 152 ntBASIC4.79□□□□□ -1.64
VARS2Q5ST30 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
VARS2Q5ST30 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
VARS2Q5ST30 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VARS2Q5ST30 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VARS2Q5ST30 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VARS2Q5ST30 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARS2Q5ST30 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARS2Q5ST30 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARS2Q5ST30 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARS2Q5ST30 MIR1265-201ENST00000408444 86 ntBASIC4.78□□□□□ -1.64
VARS2Q5ST30 PHBP16-201ENST00000446318 950 ntBASIC4.78□□□□□ -1.64
VARS2Q5ST30 PTMAP3-201ENST00000447474 330 ntBASIC4.78□□□□□ -1.64
VARS2Q5ST30 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.78□□□□□ -1.64
VARS2Q5ST30 AC023632.4-201ENST00000517783 191 ntBASIC4.78□□□□□ -1.64
VARS2Q5ST30 MRPL49P2-201ENST00000521066 465 ntBASIC4.78□□□□□ -1.64
VARS2Q5ST30 MIR3158-1-201ENST00000583596 81 ntBASIC4.78□□□□□ -1.64
VARS2Q5ST30 SNRPGP15-201ENST00000600149 222 ntBASIC4.78□□□□□ -1.64
VARS2Q5ST30 MIR8069-1-201ENST00000616627 86 ntBASIC4.78□□□□□ -1.64
VARS2Q5ST30 MIR8069-2-201ENST00000621412 86 ntBASIC4.78□□□□□ -1.64
VARS2Q5ST30 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARS2Q5ST30 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARS2Q5ST30 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VARS2Q5ST30 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
VARS2Q5ST30 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VARS2Q5ST30 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARS2Q5ST30 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VARS2Q5ST30 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
VARS2Q5ST30 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
VARS2Q5ST30 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VARS2Q5ST30 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VARS2Q5ST30 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
VARS2Q5ST30 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
VARS2Q5ST30 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
VARS2Q5ST30 MFSD8-242ENST00000641690 4199 ntBASIC4.77□□□□□ -1.65
VARS2Q5ST30 Y_RNA.410-201ENST00000383992 113 ntBASIC4.77□□□□□ -1.65
VARS2Q5ST30 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VARS2Q5ST30 RBMY2UP-201ENST00000453474 324 ntBASIC4.77□□□□□ -1.65
VARS2Q5ST30 AC105137.1-201ENST00000484355 562 ntBASIC4.77□□□□□ -1.65
VARS2Q5ST30 HMGB1P22-201ENST00000505315 124 ntBASIC4.77□□□□□ -1.65
VARS2Q5ST30 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.77□□□□□ -1.65
VARS2Q5ST30 AC005086.4-201ENST00000623065 213 ntBASIC4.77□□□□□ -1.65
VARS2Q5ST30 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
VARS2Q5ST30 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
VARS2Q5ST30 MAPK10-320ENST00000641462 6696 ntBASIC4.77□□□□□ -1.65
VARS2Q5ST30 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VARS2Q5ST30 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
VARS2Q5ST30 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VARS2Q5ST30 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms