Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC010332.2-201ENST00000613083 1904 ntBASIC3.72□□□□□ -1.81
PCDH1Q08174 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDH1Q08174 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDH1Q08174 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PCDH1Q08174 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.71□□□□□ -1.81
PCDH1Q08174 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.71□□□□□ -1.81
PCDH1Q08174 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.71□□□□□ -1.81
PCDH1Q08174 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDH1Q08174 Y_RNA.24-201ENST00000362508 103 ntBASIC3.71□□□□□ -1.82
PCDH1Q08174 Y_RNA.310-201ENST00000365063 113 ntBASIC3.71□□□□□ -1.82
PCDH1Q08174 RNU4-11P-201ENST00000365287 132 ntBASIC3.71□□□□□ -1.82
PCDH1Q08174 AL359837.1-201ENST00000381357 287 ntBASIC3.71□□□□□ -1.82
PCDH1Q08174 RPL21P65-201ENST00000406094 466 ntBASIC3.71□□□□□ -1.82
PCDH1Q08174 AL117339.2-201ENST00000430475 180 ntBASIC3.71□□□□□ -1.82
PCDH1Q08174 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDH1Q08174 SRIP1-201ENST00000489235 288 ntBASIC3.71□□□□□ -1.82
PCDH1Q08174 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDH1Q08174 DNAJC19P2-201ENST00000593340 302 ntBASIC3.71□□□□□ -1.82
PCDH1Q08174 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDH1Q08174 U7.8-201ENST00000619968 63 ntBASIC3.71□□□□□ -1.82
PCDH1Q08174 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDH1Q08174 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDH1Q08174 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDH1Q08174 RNU6-376P-201ENST00000384731 106 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 Y_RNA.572-201ENST00000384757 98 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 MIR548B-201ENST00000385247 97 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 SNORA40-201ENST00000388090 126 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PCDH1Q08174 SNORA12-201ENST00000391162 147 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 RPL30P13-201ENST00000418873 348 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 AC008267.6-201ENST00000441664 139 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 RPL23AP62-201ENST00000463396 453 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 RPL36AP48-201ENST00000485521 314 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 SCARNA8-201ENST00000515924 131 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 SNORA70.12-201ENST00000516084 153 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 RN7SKP209-201ENST00000516888 304 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 AC079598.5-201ENST00000547460 117 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 AC099778.2-201ENST00000610904 211 ntBASIC3.7□□□□□ -1.82
PCDH1Q08174 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDH1Q08174 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PCDH1Q08174 AC000403.1-201ENST00000613696 3585 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDH1Q08174 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH1Q08174 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH1Q08174 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PCDH1Q08174 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
PCDH1Q08174 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH1Q08174 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH1Q08174 MIR372-201ENST00000362225 67 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 RNU6-1205P-201ENST00000363625 106 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 RNA5SP283-201ENST00000365604 119 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 RNU6-969P-201ENST00000383900 105 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 MIR616-201ENST00000385293 97 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 MIR526A2-201ENST00000390198 65 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 AL139281.1-201ENST00000422120 335 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 SNORA71B-202ENST00000439232 272 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDH1Q08174 RNU7-141P-201ENST00000459304 62 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 SNORA25.12-201ENST00000516202 82 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 RNU6-1007P-201ENST00000516586 107 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 RNU6-453P-201ENST00000516819 85 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.69□□□□□ -1.82
PCDH1Q08174 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDH1Q08174 MIR4286-201ENST00000580651 93 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDH1Q08174 RPL17P51-201ENST00000605218 238 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 SNORA62.6-201ENST00000606322 83 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 MIR92B-201ENST00000607575 96 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 uc_338.14-201ENST00000613162 166 ntBASIC3.69□□□□□ -1.82
PCDH1Q08174 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH1Q08174 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH1Q08174 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH1Q08174 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
PCDH1Q08174 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH1Q08174 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PCDH1Q08174 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDH1Q08174 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PCDH1Q08174 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDH1Q08174 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDH1Q08174 RNA5SP97-201ENST00000365006 84 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 RNA5SP252-201ENST00000391131 119 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 SNORA48.5-201ENST00000391143 135 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 MIR513C-201ENST00000401352 84 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 Y_RNA.629-201ENST00000411368 105 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDH1Q08174 AC074290.1-201ENST00000448883 135 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 TRBV12-2-201ENST00000489763 344 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 RPL21P129-201ENST00000491732 478 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 AC025754.2-201ENST00000606491 432 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 AC012531.5-201ENST00000611375 151 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 AL391903.3-201ENST00000612158 163 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 MIR6500-201ENST00000622700 86 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 AC091953.5-201ENST00000622919 233 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 MIR3658-201ENST00000636291 56 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
PCDH1Q08174 AL353746.1-201ENST00000566293 6881 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDH1Q08174 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDH1Q08174 AC093908.1-201ENST00000623125 8092 ntBASIC3.68□□□□□ -1.82
PCDH1Q08174 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms