Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.26□□□□□ -2.21
CDH6P55285 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.26□□□□□ -2.21
CDH6P55285 snoU13.30-201ENST00000458951 104 ntBASIC1.26□□□□□ -2.21
CDH6P55285 RPL31P58-201ENST00000469001 379 ntBASIC1.26□□□□□ -2.21
CDH6P55285 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.26□□□□□ -2.21
CDH6P55285 AL163973.1-201ENST00000484753 577 ntBASIC1.26□□□□□ -2.21
CDH6P55285 AC108078.1-201ENST00000508073 725 ntBASIC1.26□□□□□ -2.21
CDH6P55285 MTCO2P4-201ENST00000517968 247 ntBASIC1.26□□□□□ -2.21
CDH6P55285 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.26□□□□□ -2.21
CDH6P55285 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CDH6P55285 AC084364.2-201ENST00000546924 395 ntBASIC1.26□□□□□ -2.21
CDH6P55285 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.26□□□□□ -2.21
CDH6P55285 AC005668.1-201ENST00000571142 476 ntBASIC1.26□□□□□ -2.21
CDH6P55285 AC023043.2-201ENST00000589678 1026 ntBASIC1.26□□□□□ -2.21
CDH6P55285 AC073413.2-201ENST00000604332 360 ntBASIC1.26□□□□□ -2.21
CDH6P55285 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.26□□□□□ -2.21
CDH6P55285 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CDH6P55285 RNU1-96P-201ENST00000364163 162 ntBASIC1.25□□□□□ -2.21
CDH6P55285 SNORA63D-201ENST00000364359 132 ntBASIC1.25□□□□□ -2.21
CDH6P55285 RNU6-348P-201ENST00000384386 107 ntBASIC1.25□□□□□ -2.21
CDH6P55285 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.25□□□□□ -2.21
CDH6P55285 RPS6P15-201ENST00000431996 751 ntBASIC1.25□□□□□ -2.21
CDH6P55285 AC027119.1-201ENST00000440877 241 ntBASIC1.25□□□□□ -2.21
CDH6P55285 AC069257.2-201ENST00000441819 155 ntBASIC1.25□□□□□ -2.21
CDH6P55285 USP9YP29-201ENST00000445112 563 ntBASIC1.25□□□□□ -2.21
CDH6P55285 RNU7-180P-201ENST00000459240 63 ntBASIC1.25□□□□□ -2.21
CDH6P55285 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.25□□□□□ -2.21
CDH6P55285 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.25□□□□□ -2.21
CDH6P55285 AL157834.3-201ENST00000615543 103 ntBASIC1.25□□□□□ -2.21
CDH6P55285 uc_338.34-201ENST00000617467 174 ntBASIC1.25□□□□□ -2.21
CDH6P55285 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.25□□□□□ -2.21
CDH6P55285 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CDH6P55285 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CDH6P55285 RNU6-996P-201ENST00000365438 107 ntBASIC1.24□□□□□ -2.21
CDH6P55285 Y_RNA.381-201ENST00000365666 102 ntBASIC1.24□□□□□ -2.21
CDH6P55285 RNU6-1106P-201ENST00000390845 107 ntBASIC1.24□□□□□ -2.21
CDH6P55285 RNA5SP219-201ENST00000390940 113 ntBASIC1.24□□□□□ -2.21
CDH6P55285 AC004965.1-201ENST00000413033 213 ntBASIC1.24□□□□□ -2.21
CDH6P55285 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.24□□□□□ -2.21
CDH6P55285 RPS27P16-201ENST00000425758 201 ntBASIC1.24□□□□□ -2.21
CDH6P55285 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.24□□□□□ -2.21
CDH6P55285 MTCO3P29-201ENST00000432119 779 ntBASIC1.24□□□□□ -2.21
CDH6P55285 USP9YP28-201ENST00000435142 589 ntBASIC1.24□□□□□ -2.21
CDH6P55285 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.24□□□□□ -2.21
CDH6P55285 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.24□□□□□ -2.21
CDH6P55285 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.24□□□□□ -2.21
CDH6P55285 snoU13.6-201ENST00000458785 104 ntBASIC1.24□□□□□ -2.21
CDH6P55285 HMGN2P9-201ENST00000476875 229 ntBASIC1.24□□□□□ -2.21
CDH6P55285 CCDC34P1-201ENST00000507441 517 ntBASIC1.24□□□□□ -2.21
CDH6P55285 RNU6-856P-201ENST00000516959 98 ntBASIC1.24□□□□□ -2.21
CDH6P55285 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.24□□□□□ -2.21
CDH6P55285 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.24□□□□□ -2.21
CDH6P55285 AC090115.3-201ENST00000553218 849 ntBASIC1.24□□□□□ -2.21
CDH6P55285 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.24□□□□□ -2.21
CDH6P55285 MIR4528-201ENST00000577763 90 ntBASIC1.24□□□□□ -2.21
CDH6P55285 AC004223.2-201ENST00000590309 544 ntBASIC1.24□□□□□ -2.21
CDH6P55285 NIFKP6-201ENST00000598115 845 ntBASIC1.24□□□□□ -2.21
CDH6P55285 MIR3976-201ENST00000606807 139 ntBASIC1.24□□□□□ -2.21
CDH6P55285 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.24□□□□□ -2.21
CDH6P55285 AC009541.1-201ENST00000438279 2662 ntBASIC1.23□□□□□ -2.21
CDH6P55285 AC091812.1-201ENST00000432235 1948 ntBASIC1.23□□□□□ -2.21
CDH6P55285 SNORA25.8-201ENST00000364831 128 ntBASIC1.23□□□□□ -2.21
CDH6P55285 SNORA18.2-201ENST00000383865 132 ntBASIC1.23□□□□□ -2.21
CDH6P55285 RNU6-877P-201ENST00000383868 107 ntBASIC1.23□□□□□ -2.21
CDH6P55285 MIR548B-201ENST00000385247 97 ntBASIC1.23□□□□□ -2.21
CDH6P55285 RNU6-1093P-201ENST00000391194 107 ntBASIC1.23□□□□□ -2.21
CDH6P55285 AL135790.2-201ENST00000437701 267 ntBASIC1.23□□□□□ -2.21
CDH6P55285 MTCO2P3-201ENST00000442543 421 ntBASIC1.23□□□□□ -2.21
CDH6P55285 AC073415.1-201ENST00000449240 153 ntBASIC1.23□□□□□ -2.21
CDH6P55285 RNU7-138P-201ENST00000459479 64 ntBASIC1.23□□□□□ -2.21
CDH6P55285 ARL2BPP4-201ENST00000506854 471 ntBASIC1.23□□□□□ -2.21
CDH6P55285 AC067942.3-201ENST00000512025 362 ntBASIC1.23□□□□□ -2.21
CDH6P55285 Y_RNA.695-201ENST00000516715 107 ntBASIC1.23□□□□□ -2.21
CDH6P55285 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.23□□□□□ -2.21
CDH6P55285 MTND4P7-201ENST00000523876 130 ntBASIC1.23□□□□□ -2.21
CDH6P55285 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.23□□□□□ -2.21
CDH6P55285 AC019288.1-201ENST00000557918 224 ntBASIC1.23□□□□□ -2.21
CDH6P55285 HULC.1-201ENST00000612720 240 ntBASIC1.23□□□□□ -2.21
CDH6P55285 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.23□□□□□ -2.21
CDH6P55285 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.23□□□□□ -2.21
CDH6P55285 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CDH6P55285 AL391987.6-201ENST00000305671 199 ntBASIC1.22□□□□□ -2.21
CDH6P55285 RNU6-562P-201ENST00000362731 107 ntBASIC1.22□□□□□ -2.21
CDH6P55285 MIR300-201ENST00000401138 83 ntBASIC1.22□□□□□ -2.21
CDH6P55285 AL606923.1-201ENST00000406616 190 ntBASIC1.22□□□□□ -2.21
CDH6P55285 AL161935.2-201ENST00000414627 60 ntBASIC1.22□□□□□ -2.21
CDH6P55285 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.22□□□□□ -2.21
CDH6P55285 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.22□□□□□ -2.21
CDH6P55285 AC073464.1-201ENST00000429823 534 ntBASIC1.22□□□□□ -2.21
CDH6P55285 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.22□□□□□ -2.21
CDH6P55285 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.22□□□□□ -2.21
CDH6P55285 OR2AQ1P-201ENST00000451972 200 ntBASIC1.22□□□□□ -2.21
CDH6P55285 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.22□□□□□ -2.21
CDH6P55285 RPL30P7-201ENST00000479312 323 ntBASIC1.22□□□□□ -2.21
CDH6P55285 AC091435.1-201ENST00000505442 584 ntBASIC1.22□□□□□ -2.21
CDH6P55285 RNU6-1041P-201ENST00000516254 102 ntBASIC1.22□□□□□ -2.21
CDH6P55285 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.22□□□□□ -2.21
CDH6P55285 DEFB131C-201ENST00000528817 165 ntBASIC1.22□□□□□ -2.21
CDH6P55285 MIR3937-201ENST00000580135 106 ntBASIC1.22□□□□□ -2.21
CDH6P55285 AL391646.1-201ENST00000603860 190 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms