Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC240442.1-201ENST00000616055 283 ntBASIC2.55□□□□□ -2
SOX2P48431 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.55□□□□□ -2
SOX2P48431 U4.1-201ENST00000620349 87 ntBASIC2.55□□□□□ -2
SOX2P48431 AC090517.3-201ENST00000625170 141 ntBASIC2.55□□□□□ -2
SOX2P48431 MIR6733-201ENST00000635723 61 ntBASIC2.55□□□□□ -2
SOX2P48431 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SOX2P48431 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SOX2P48431 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.55□□□□□ -2
SOX2P48431 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
SOX2P48431 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.54□□□□□ -2
SOX2P48431 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.54□□□□□ -2
SOX2P48431 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SOX2P48431 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.54□□□□□ -2
SOX2P48431 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SOX2P48431 Y_RNA.19-201ENST00000362462 99 ntBASIC2.54□□□□□ -2
SOX2P48431 RNU1-109P-201ENST00000383960 147 ntBASIC2.54□□□□□ -2
SOX2P48431 RNU6-926P-201ENST00000384075 107 ntBASIC2.54□□□□□ -2
SOX2P48431 MIR218-1-201ENST00000384999 110 ntBASIC2.54□□□□□ -2
SOX2P48431 MIR549A-201ENST00000385268 96 ntBASIC2.54□□□□□ -2
SOX2P48431 AL590004.2-201ENST00000404787 371 ntBASIC2.54□□□□□ -2
SOX2P48431 RNU4-47P-201ENST00000410876 114 ntBASIC2.54□□□□□ -2
SOX2P48431 RNU6-130P-201ENST00000411112 103 ntBASIC2.54□□□□□ -2
SOX2P48431 AL513477.1-202ENST00000417061 214 ntBASIC2.54□□□□□ -2
SOX2P48431 RPL30P4-201ENST00000429309 333 ntBASIC2.54□□□□□ -2
SOX2P48431 IPO7P1-201ENST00000442031 636 ntBASIC2.54□□□□□ -2
SOX2P48431 HSPE1P18-201ENST00000517602 280 ntBASIC2.54□□□□□ -2
SOX2P48431 MIR3944-201ENST00000581277 108 ntBASIC2.54□□□□□ -2
SOX2P48431 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.54□□□□□ -2
SOX2P48431 AC010620.2-201ENST00000600135 313 ntBASIC2.54□□□□□ -2
SOX2P48431 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SOX2P48431 MAPK10-266ENST00000641066 6555 ntBASIC2.54□□□□□ -2
SOX2P48431 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.53□□□□□ -2
SOX2P48431 AC009487.2-201ENST00000420969 6821 ntBASIC2.53□□□□□ -2
SOX2P48431 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.53□□□□□ -2
SOX2P48431 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.53□□□□□ -2
SOX2P48431 Y_RNA.179-201ENST00000363844 90 ntBASIC2.53□□□□□ -2
SOX2P48431 RNU6-1180P-201ENST00000364935 107 ntBASIC2.53□□□□□ -2
SOX2P48431 RNU6-1145P-201ENST00000384246 107 ntBASIC2.53□□□□□ -2
SOX2P48431 Y_RNA.556-201ENST00000384677 113 ntBASIC2.53□□□□□ -2
SOX2P48431 MIR512-1-201ENST00000384913 84 ntBASIC2.53□□□□□ -2
SOX2P48431 MRPL35P1-201ENST00000404272 572 ntBASIC2.53□□□□□ -2
SOX2P48431 U6atac.2-201ENST00000408644 118 ntBASIC2.53□□□□□ -2
SOX2P48431 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.53□□□□□ -2
SOX2P48431 RNA5SP76-201ENST00000516277 87 ntBASIC2.53□□□□□ -2
SOX2P48431 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.53□□□□□ -2
SOX2P48431 AC004817.2-201ENST00000561794 651 ntBASIC2.53□□□□□ -2
SOX2P48431 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.53□□□□□ -2
SOX2P48431 MIR5680-201ENST00000577577 84 ntBASIC2.53□□□□□ -2
SOX2P48431 AC023043.3-201ENST00000593113 385 ntBASIC2.53□□□□□ -2
SOX2P48431 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.53□□□□□ -2
SOX2P48431 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.53□□□□□ -2
SOX2P48431 AC011476.5-201ENST00000615594 130 ntBASIC2.53□□□□□ -2
SOX2P48431 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.53□□□□□ -2
SOX2P48431 AC005562.2-201ENST00000618264 111 ntBASIC2.53□□□□□ -2
SOX2P48431 AC091953.5-201ENST00000622919 233 ntBASIC2.53□□□□□ -2
SOX2P48431 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
SOX2P48431 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.53□□□□□ -2
SOX2P48431 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.53□□□□□ -2
SOX2P48431 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SOX2P48431 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SOX2P48431 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SOX2P48431 RNU6-793P-201ENST00000384233 104 ntBASIC2.52□□□□□ -2.01
SOX2P48431 SNORA54-201ENST00000384281 123 ntBASIC2.52□□□□□ -2.01
SOX2P48431 Y_RNA.512-201ENST00000384518 102 ntBASIC2.52□□□□□ -2.01
SOX2P48431 Y_RNA.595-201ENST00000410403 105 ntBASIC2.52□□□□□ -2.01
SOX2P48431 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.52□□□□□ -2.01
SOX2P48431 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.52□□□□□ -2.01
SOX2P48431 AC027124.2-201ENST00000428249 105 ntBASIC2.52□□□□□ -2.01
SOX2P48431 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.52□□□□□ -2.01
SOX2P48431 AC010095.1-201ENST00000443543 144 ntBASIC2.52□□□□□ -2.01
SOX2P48431 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.52□□□□□ -2.01
SOX2P48431 Y_RNA.683-201ENST00000516508 93 ntBASIC2.52□□□□□ -2.01
SOX2P48431 CYCSP23-201ENST00000519781 313 ntBASIC2.52□□□□□ -2.01
SOX2P48431 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.52□□□□□ -2.01
SOX2P48431 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.52□□□□□ -2.01
SOX2P48431 AC023824.2-201ENST00000566185 400 ntBASIC2.52□□□□□ -2.01
SOX2P48431 MYL12BP1-201ENST00000569826 507 ntBASIC2.52□□□□□ -2.01
SOX2P48431 AC105245.1-201ENST00000581934 244 ntBASIC2.52□□□□□ -2.01
SOX2P48431 AC069294.1-201ENST00000608397 350 ntBASIC2.52□□□□□ -2.01
SOX2P48431 AC090115.4-201ENST00000609970 188 ntBASIC2.52□□□□□ -2.01
SOX2P48431 MIR8062-201ENST00000621515 85 ntBASIC2.52□□□□□ -2.01
SOX2P48431 U6.105-201ENST00000637379 88 ntBASIC2.52□□□□□ -2.01
SOX2P48431 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.52□□□□□ -2.01
SOX2P48431 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SOX2P48431 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.51□□□□□ -2.01
SOX2P48431 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.51□□□□□ -2.01
SOX2P48431 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.51□□□□□ -2.01
SOX2P48431 AC080128.1-201ENST00000474389 1917 ntBASIC2.51□□□□□ -2.01
SOX2P48431 RNU1-62P-201ENST00000362599 164 ntBASIC2.51□□□□□ -2.01
SOX2P48431 Y_RNA.64-201ENST00000362845 102 ntBASIC2.51□□□□□ -2.01
SOX2P48431 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.51□□□□□ -2.01
SOX2P48431 RNU6-702P-201ENST00000364982 107 ntBASIC2.51□□□□□ -2.01
SOX2P48431 SNORA18.3-201ENST00000384122 132 ntBASIC2.51□□□□□ -2.01
SOX2P48431 MIR183-201ENST00000384958 110 ntBASIC2.51□□□□□ -2.01
SOX2P48431 MIR449B-201ENST00000384995 97 ntBASIC2.51□□□□□ -2.01
SOX2P48431 AL079342.1-201ENST00000401460 267 ntBASIC2.51□□□□□ -2.01
SOX2P48431 AL139281.1-201ENST00000422120 335 ntBASIC2.51□□□□□ -2.01
SOX2P48431 AC005326.1-201ENST00000429197 123 ntBASIC2.51□□□□□ -2.01
SOX2P48431 AC007395.1-201ENST00000451333 677 ntBASIC2.51□□□□□ -2.01
SOX2P48431 AC107016.2-201ENST00000547968 190 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms