Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GPC1P35052 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.03□□□□□ -1.76
GPC1P35052 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
GPC1P35052 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.03□□□□□ -1.76
GPC1P35052 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.02□□□□□ -1.77
GPC1P35052 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
GPC1P35052 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.02□□□□□ -1.77
GPC1P35052 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GPC1P35052 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
GPC1P35052 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
GPC1P35052 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
GPC1P35052 SNORA27.1-201ENST00000362604 124 ntBASIC4.02□□□□□ -1.77
GPC1P35052 RNU6-271P-201ENST00000363858 105 ntBASIC4.02□□□□□ -1.77
GPC1P35052 RNU1-57P-201ENST00000384491 166 ntBASIC4.02□□□□□ -1.77
GPC1P35052 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GPC1P35052 U6atac.2-201ENST00000408644 118 ntBASIC4.02□□□□□ -1.77
GPC1P35052 MIR1179-201ENST00000408703 91 ntBASIC4.02□□□□□ -1.77
GPC1P35052 RPL39P40-201ENST00000445481 146 ntBASIC4.02□□□□□ -1.77
GPC1P35052 RN7SL98P-201ENST00000462271 300 ntBASIC4.02□□□□□ -1.77
GPC1P35052 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
GPC1P35052 TRAV8-5-201ENST00000537369 341 ntBASIC4.02□□□□□ -1.77
GPC1P35052 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.02□□□□□ -1.77
GPC1P35052 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
GPC1P35052 LINC02471-203ENST00000641941 4752 ntBASIC4.02□□□□□ -1.77
GPC1P35052 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.02□□□□□ -1.77
GPC1P35052 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.02□□□□□ -1.77
GPC1P35052 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
GPC1P35052 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GPC1P35052 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.01□□□□□ -1.77
GPC1P35052 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
GPC1P35052 RNU6-674P-201ENST00000363831 107 ntBASIC4.01□□□□□ -1.77
GPC1P35052 RNU4-13P-201ENST00000364019 141 ntBASIC4.01□□□□□ -1.77
GPC1P35052 DYNLT3P1-201ENST00000378574 347 ntBASIC4.01□□□□□ -1.77
GPC1P35052 SNORA72-201ENST00000384339 132 ntBASIC4.01□□□□□ -1.77
GPC1P35052 MIR181A2-201ENST00000384863 110 ntBASIC4.01□□□□□ -1.77
GPC1P35052 RPS29P19-201ENST00000479709 171 ntBASIC4.01□□□□□ -1.77
GPC1P35052 RNA5SP73-201ENST00000516744 108 ntBASIC4.01□□□□□ -1.77
GPC1P35052 MIR4715-201ENST00000584117 79 ntBASIC4.01□□□□□ -1.77
GPC1P35052 HSPE1P7-201ENST00000604681 321 ntBASIC4.01□□□□□ -1.77
GPC1P35052 MIR4727-201ENST00000622232 55 ntBASIC4.01□□□□□ -1.77
GPC1P35052 AC010889.1-201ENST00000566193 2666 ntBASIC4.01□□□□□ -1.77
GPC1P35052 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.01□□□□□ -1.77
GPC1P35052 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GPC1P35052 AC103988.1-201ENST00000566382 2177 ntBASIC4□□□□□ -1.77
GPC1P35052 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4□□□□□ -1.77
GPC1P35052 MTND5P18-201ENST00000445624 1801 ntBASIC4□□□□□ -1.77
GPC1P35052 AL159152.1-201ENST00000635019 2587 ntBASIC4□□□□□ -1.77
GPC1P35052 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4□□□□□ -1.77
GPC1P35052 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4□□□□□ -1.77
GPC1P35052 SNORA31-201ENST00000362607 130 ntBASIC4□□□□□ -1.77
GPC1P35052 Y_RNA.91-201ENST00000363042 107 ntBASIC4□□□□□ -1.77
GPC1P35052 SNORD73B-201ENST00000364394 72 ntBASIC4□□□□□ -1.77
GPC1P35052 YME1L1P1-201ENST00000429435 297 ntBASIC4□□□□□ -1.77
GPC1P35052 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4□□□□□ -1.77
GPC1P35052 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4□□□□□ -1.77
GPC1P35052 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4□□□□□ -1.77
GPC1P35052 RNU7-57P-201ENST00000459540 60 ntBASIC4□□□□□ -1.77
GPC1P35052 RPL36AP21-201ENST00000490372 323 ntBASIC4□□□□□ -1.77
GPC1P35052 PARP4P3-201ENST00000510265 317 ntBASIC4□□□□□ -1.77
GPC1P35052 RNU6-1098P-201ENST00000516772 96 ntBASIC4□□□□□ -1.77
GPC1P35052 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4□□□□□ -1.77
GPC1P35052 AL160236.1-201ENST00000556317 195 ntBASIC4□□□□□ -1.77
GPC1P35052 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4□□□□□ -1.77
GPC1P35052 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4□□□□□ -1.77
GPC1P35052 AL020997.2-201ENST00000602607 184 ntBASIC4□□□□□ -1.77
GPC1P35052 AL021707.8-201ENST00000609428 183 ntBASIC4□□□□□ -1.77
GPC1P35052 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4□□□□□ -1.77
GPC1P35052 AC006504.1-201ENST00000562493 3666 ntBASIC4□□□□□ -1.77
GPC1P35052 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
GPC1P35052 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4□□□□□ -1.77
GPC1P35052 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
GPC1P35052 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
GPC1P35052 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
GPC1P35052 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
GPC1P35052 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
GPC1P35052 AC068647.1-201ENST00000489539 2265 ntBASIC3.99□□□□□ -1.77
GPC1P35052 RNA5SP447-201ENST00000363749 119 ntBASIC3.99□□□□□ -1.77
GPC1P35052 RNU1-32P-201ENST00000363937 159 ntBASIC3.99□□□□□ -1.77
GPC1P35052 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.99□□□□□ -1.77
GPC1P35052 AC245291.1-201ENST00000419501 328 ntBASIC3.99□□□□□ -1.77
GPC1P35052 RPL23AP46-201ENST00000438548 490 ntBASIC3.99□□□□□ -1.77
GPC1P35052 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.99□□□□□ -1.77
GPC1P35052 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.99□□□□□ -1.77
GPC1P35052 SNORD65B-201ENST00000459126 73 ntBASIC3.99□□□□□ -1.77
GPC1P35052 snoU13.1-201ENST00000459157 104 ntBASIC3.99□□□□□ -1.77
GPC1P35052 AC083906.5-201ENST00000503722 328 ntBASIC3.99□□□□□ -1.77
GPC1P35052 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.99□□□□□ -1.77
GPC1P35052 AL592156.1-201ENST00000508758 304 ntBASIC3.99□□□□□ -1.77
GPC1P35052 RNA5SP20-201ENST00000515976 84 ntBASIC3.99□□□□□ -1.77
GPC1P35052 SNORA18.4-201ENST00000516440 124 ntBASIC3.99□□□□□ -1.77
GPC1P35052 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.99□□□□□ -1.77
GPC1P35052 AC022655.2-201ENST00000577280 318 ntBASIC3.99□□□□□ -1.77
GPC1P35052 MIR432-201ENST00000606207 94 ntBASIC3.99□□□□□ -1.77
GPC1P35052 AL022345.2-201ENST00000606307 135 ntBASIC3.99□□□□□ -1.77
GPC1P35052 MIR7702-201ENST00000621931 59 ntBASIC3.99□□□□□ -1.77
GPC1P35052 MIR7641-1-201ENST00000627518 61 ntBASIC3.99□□□□□ -1.77
GPC1P35052 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
GPC1P35052 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
GPC1P35052 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.99□□□□□ -1.77
GPC1P35052 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 226.2 ms