Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.18□□□□□ -2.44
COL6A3P12111 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.18□□□□□ -2.44
COL6A3P12111 GTF2IP3-201ENST00000433887 494 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.18□□□□□ -2.44
COL6A3P12111 MTND5P2-201ENST00000442927 1142 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 RPL30P15-201ENST00000457129 321 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AC015724.1-201ENST00000478577 156 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL6A3P12111 MTND2P33-201ENST00000506452 1031 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 SNORD116-30-201ENST00000516468 85 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AC022868.1-201ENST00000517767 391 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.18□□□□□ -2.44
COL6A3P12111 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL6A3P12111 SUB1P2-201ENST00000556401 297 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AC137800.2-201ENST00000574375 120 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 MIR3169-201ENST00000578032 83 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AC112187.2-201ENST00000604345 283 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 AC010133.1-201ENST00000615809 842 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 SNORD3E-202ENST00000627253 216 ntBASIC-0.18□□□□□ -2.44
COL6A3P12111 RNU6-862P-201ENST00000362804 105 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 RNU6-756P-201ENST00000383997 107 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 AC007435.1-201ENST00000421086 415 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 AL590632.1-201ENST00000424289 371 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL6A3P12111 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.19□□□□□ -2.44
COL6A3P12111 snoU13.30-201ENST00000458951 104 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 MTCO2P15-201ENST00000532655 656 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL6A3P12111 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.19□□□□□ -2.44
COL6A3P12111 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.19□□□□□ -2.44
COL6A3P12111 AC116165.2-201ENST00000616705 206 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 MIR6755-201ENST00000619993 66 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 SEC63P2-201ENST00000503863 1939 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 MTND4P5-201ENST00000435821 1374 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.19□□□□□ -2.44
COL6A3P12111 RNU6-505P-201ENST00000384427 107 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 RNU2-59P-201ENST00000410482 191 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL6A3P12111 RPL31P54-201ENST00000429803 370 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 MTND2P5-201ENST00000432656 1006 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL6A3P12111 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.19□□□□□ -2.44
COL6A3P12111 AC022364.2-201ENST00000457963 554 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 AC107297.1-201ENST00000459991 176 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.19□□□□□ -2.44
COL6A3P12111 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL6A3P12111 AC025459.1-201ENST00000504072 156 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 HMGB1P28-201ENST00000507778 552 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 MTND5P13-201ENST00000513046 1079 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 MTND4LP26-201ENST00000518144 282 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 AC023442.1-201ENST00000531247 422 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 MIR5697-201ENST00000578045 78 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 MIR5695-201ENST00000579717 85 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 AF038458.1-201ENST00000588406 262 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 AL353778.1-201ENST00000603149 408 ntBASIC-0.19□□□□□ -2.44
COL6A3P12111 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.19□□□□□ -2.44
COL6A3P12111 SNORA4.2-201ENST00000365313 147 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 SNORD114-12-201ENST00000365400 75 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 RNU6-331P-201ENST00000384724 107 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC093809.1-201ENST00000509155 340 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.2□□□□□ -2.44
COL6A3P12111 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.2□□□□□ -2.44
COL6A3P12111 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.2□□□□□ -2.44
COL6A3P12111 AC027338.1-201ENST00000514840 825 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC110760.3-202ENST00000515177 371 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 RNU6-390P-201ENST00000516259 103 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 RNA5SP481-201ENST00000516814 122 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 MRPS36P5-201ENST00000551909 298 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AL020997.3-201ENST00000602843 359 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL6A3P12111 RNU6-94P-201ENST00000607728 107 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.2□□□□□ -2.44
COL6A3P12111 AC016597.2-201ENST00000613256 341 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 MIR4275-201ENST00000636486 87 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 ZNF849P-201ENST00000594711 1566 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 SNORD113.3-201ENST00000364630 78 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
COL6A3P12111 AL357139.1-201ENST00000407792 426 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 BX664727.1-201ENST00000416024 466 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL6A3P12111 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.2□□□□□ -2.44
COL6A3P12111 AL008629.1-201ENST00000438615 184 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC091021.1-201ENST00000468051 388 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL6A3P12111 OR9P1P-201ENST00000496431 281 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL6A3P12111 RBBP4P6-201ENST00000508098 202 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 RNA5SP470-201ENST00000516463 106 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC105185.1-201ENST00000518705 535 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL6A3P12111 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms