Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SNORA31.5-201ENST00000516190 133 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 RNU6-1234P-201ENST00000516877 103 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 TGIF1P1-201ENST00000558095 802 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 AC021231.3-201ENST00000558497 370 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 AL162274.2-201ENST00000614406 332 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 AL136164.4-201ENST00000625013 2135 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 AC092593.1-201ENST00000515413 1815 ntBASIC4.65□□□□□ -1.67
CSB-PGBD3P0DP91 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 AC007496.3-201ENST00000624987 3443 ntBASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 Y_RNA.101-201ENST00000363154 102 ntBASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 RNU6-1077P-201ENST00000410506 102 ntBASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 AC010095.1-201ENST00000443543 144 ntBASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 AC090616.3-201ENST00000582184 217 ntBASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 MIR4276-201ENST00000584832 70 ntBASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 AC010889.1-201ENST00000566193 2666 ntBASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 AL391516.1-201ENST00000554380 2449 ntBASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.64□□□□□ -1.67
CSB-PGBD3P0DP91 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 Y_RNA.121-201ENST00000363309 113 ntBASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 RNU6-1285P-201ENST00000363480 105 ntBASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 SNORD116-14-201ENST00000383894 92 ntBASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 SNORD116-17-201ENST00000383929 92 ntBASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 SNORD116-15-201ENST00000384445 92 ntBASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 SNORA20-201ENST00000384662 132 ntBASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 SNORD116-19-201ENST00000384729 92 ntBASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 RNU6-239P-201ENST00000390990 99 ntBASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 AL441985.1-201ENST00000457727 251 ntBASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 SNORA25.12-201ENST00000516202 82 ntBASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CSB-PGBD3P0DP91 RNU4-17P-201ENST00000365598 141 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 Y_RNA.500-201ENST00000384466 111 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 AL133475.1-201ENST00000404414 305 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 RNU6-1199P-201ENST00000411249 104 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 RAB28P5-201ENST00000427490 651 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 AL031183.1-201ENST00000457667 207 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 FCF1P8-201ENST00000510322 597 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 RNU7-121P-201ENST00000516604 62 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 RN7SKP209-201ENST00000516888 304 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 SNORA31.21-201ENST00000517180 77 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 AC112693.2-201ENST00000556538 232 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 MIR4513-201ENST00000581077 86 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 AC006386.2-201ENST00000624491 75 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 AC012005.1-201ENST00000624575 75 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 AC007256.1-201ENST00000392253 2765 ntBASIC4.62□□□□□ -1.67
CSB-PGBD3P0DP91 Z83843.1-201ENST00000604070 3685 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 RNU6-137P-201ENST00000363680 108 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 SNORD74.4-201ENST00000364129 80 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 RNU6-750P-201ENST00000390946 107 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 AC096649.2-201ENST00000416186 393 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 CR769767.1-201ENST00000436337 346 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 snoU13.6-201ENST00000458785 104 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 AC115990.1-201ENST00000526957 301 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 EIF4BP1-201ENST00000554881 351 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 AC105137.2-201ENST00000569073 466 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 DEFB117-201ENST00000602356 141 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 AC002543.1-201ENST00000299783 1954 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CSB-PGBD3P0DP91 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 RNU6-873P-201ENST00000363833 107 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 SNORA72.2-201ENST00000365028 127 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 RNU4-11P-201ENST00000365287 132 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 MIR147B-201ENST00000390185 80 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 SNORA26.3-201ENST00000391119 136 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 EI24P2-201ENST00000397776 1076 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 RNA5SP306-201ENST00000411087 107 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 AC019205.3-201ENST00000424573 156 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 Z75741.1-201ENST00000446793 314 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 Y_RNA.637-201ENST00000459424 114 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 UBE2DNL-203ENST00000474922 222 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 RNA5SP341-201ENST00000516261 117 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 Y_RNA.686-201ENST00000516548 134 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 LARP7P3-201ENST00000579888 337 ntBASIC4.6□□□□□ -1.67
CSB-PGBD3P0DP91 AC025946.2-201ENST00000603398 234 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms