Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RNU6-125P-201ENST00000384505 107 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 SNORD58.1-201ENST00000391313 66 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 MIR887-201ENST00000401258 79 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 MIR548H3-201ENST00000408771 118 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 AC097463.2-201ENST00000421074 142 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 AL606753.1-201ENST00000427435 87 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 Z98742.2-201ENST00000431564 187 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 AL139132.1-201ENST00000431587 344 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM38O00635 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM38O00635 RPEP5-201ENST00000441137 268 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 AC243964.1-201ENST00000441814 261 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 Z96811.1-201ENST00000445880 108 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM38O00635 snoU13.14-201ENST00000459372 104 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 AC091826.1-201ENST00000514065 313 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 RN7SKP272-201ENST00000516988 232 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 GTF3AP2-201ENST00000557014 266 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM38O00635 AL158827.2-201ENST00000602494 330 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 AL390123.1-201ENST00000603216 237 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 AL691447.3-201ENST00000635020 330 ntBASIC2.99□□□□□ -1.93
TRIM38O00635 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
TRIM38O00635 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.99□□□□□ -1.93
TRIM38O00635 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM38O00635 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 Z75746.1-201ENST00000440243 2080 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 RNU6-461P-201ENST00000364195 107 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 RNU6-611P-201ENST00000384276 104 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 Y_RNA.471-201ENST00000384312 102 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 RNU6-493P-201ENST00000391321 108 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM38O00635 RNA5SP274-201ENST00000410484 108 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 RNU6-1328P-201ENST00000410938 106 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 AL030996.1-201ENST00000411430 235 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 AC138623.1-201ENST00000418060 216 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 AL139281.1-201ENST00000422120 335 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM38O00635 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM38O00635 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM38O00635 RNA5SP356-201ENST00000515972 94 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 RNU7-4P-201ENST00000516961 62 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 SCARNA3-201ENST00000517097 143 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 AC034114.1-201ENST00000520293 285 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.98□□□□□ -1.93
TRIM38O00635 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.98□□□□□ -1.93
TRIM38O00635 AC103810.1-201ENST00000579873 453 ntBASIC2.98□□□□□ -1.93
TRIM38O00635 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM38O00635 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM38O00635 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM38O00635 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM38O00635 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM38O00635 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
TRIM38O00635 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
TRIM38O00635 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM38O00635 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM38O00635 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM38O00635 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM38O00635 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM38O00635 Y_RNA.65-201ENST00000362846 100 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 SNORD113-1-201ENST00000365321 69 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 Y_RNA.464-201ENST00000384282 110 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 RNU6-790P-201ENST00000384479 105 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 Y_RNA.526-201ENST00000384572 110 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 Y_RNA.533-201ENST00000384596 114 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 MIR627-201ENST00000384979 97 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 MIR625-201ENST00000385047 85 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 AL133475.1-201ENST00000404414 305 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 AL603910.2-201ENST00000407268 136 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 U6atac.2-201ENST00000408644 118 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 AL139156.1-201ENST00000412785 841 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 EIF4EP2-201ENST00000422816 654 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 DAP3P1-201ENST00000441522 278 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 AL135938.1-201ENST00000443141 297 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.97□□□□□ -1.93
TRIM38O00635 AC080013.2-201ENST00000460866 323 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 RN7SL633P-201ENST00000488974 297 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 Y_RNA.703-201ENST00000516846 111 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 RNU6-1212P-201ENST00000517023 104 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 AC022868.1-201ENST00000517767 391 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 AC027176.1-201ENST00000560204 514 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 AC004584.2-201ENST00000570407 410 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 CPDP1-201ENST00000579660 283 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM38O00635 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 AC097372.5-201ENST00000623665 376 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 AL450472.1-202ENST00000637286 180 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 AC241585.2-209ENST00000638217 143 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM38O00635 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM38O00635 AC080128.1-201ENST00000474389 1917 ntBASIC2.97□□□□□ -1.93
TRIM38O00635 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM38O00635 AP000560.1-201ENST00000624150 1937 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 RPL9P7-201ENST00000330965 580 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 MIR449A-201ENST00000362113 91 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 MIR335-201ENST00000362173 94 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 RNU6-545P-201ENST00000362681 104 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 snoU2_19.2-201ENST00000363024 80 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 Y_RNA.183-201ENST00000363882 113 ntBASIC2.96□□□□□ -1.94
TRIM38O00635 RNU6-1141P-201ENST00000364520 107 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms