Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 MIR29B2-201ENST00000385055 81 ntBASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 SDAD1P3-201ENST00000427380 333 ntBASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 RPL23AP22-201ENST00000437556 453 ntBASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 RPS15AP7-201ENST00000439294 405 ntBASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 SCARNA3-201ENST00000517097 143 ntBASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 AC034114.1-201ENST00000520293 285 ntBASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 AC005296.1-201ENST00000616145 209 ntBASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 AC092435.3-201ENST00000565538 3654 ntBASIC3.46□□□□□ -1.86
PTCH2Q9Y6C5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 RNU4-15P-201ENST00000362613 141 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 Y_RNA.133-201ENST00000363428 110 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 Y_RNA.149-201ENST00000363558 117 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 U3.9-201ENST00000363823 204 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 RNU6-879P-201ENST00000364328 108 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 SNORD21-201ENST00000383953 95 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 MIR10B-201ENST00000385011 110 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 SNORD78.2-201ENST00000391076 69 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 MIR887-201ENST00000401258 79 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 HMGB3P2-201ENST00000411913 584 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 AC073910.1-201ENST00000445047 438 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 U8.22-201ENST00000459141 133 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 U8.20-201ENST00000459445 131 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 AC117440.1-201ENST00000474107 571 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 AC006483.1-201ENST00000487308 313 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 AC145146.1-201ENST00000496370 254 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 MRPS35P2-201ENST00000508242 191 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 Y_RNA.713-201ENST00000517013 96 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 AC131281.1-201ENST00000522984 164 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 AC026470.2-201ENST00000561492 181 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 MIR5695-201ENST00000579717 85 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 AC010620.2-201ENST00000600135 313 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 AL121655.1-201ENST00000605811 308 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 PCGEM1.1-201ENST00000613431 131 ntBASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCH2Q9Y6C5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 RNU6-1301P-201ENST00000362724 104 ntBASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 RNU6-245P-201ENST00000384020 107 ntBASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 Y_RNA.471-201ENST00000384312 102 ntBASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 U6atac.2-201ENST00000408644 118 ntBASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 RNU2-52P-201ENST00000410680 190 ntBASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 WARS2P1-201ENST00000429678 537 ntBASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 AC073901.1-201ENST00000462471 408 ntBASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 EIF4A1P12-201ENST00000551910 141 ntBASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 SNRPGP20-201ENST00000604477 205 ntBASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 AL021368.2-201ENST00000606125 5352 ntBASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 BX322639.1-202ENST00000423987 2213 ntBASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PTCH2Q9Y6C5 AC009487.2-201ENST00000420969 6821 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 snoU2_19.1-201ENST00000362361 80 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 Y_RNA.276-201ENST00000364732 109 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 RNU6-378P-201ENST00000384324 107 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 MIR196B-201ENST00000384852 84 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 RNA5SP213-201ENST00000391031 106 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 SNORA46.1-201ENST00000391069 153 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 AC087499.2-201ENST00000432861 149 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 AC112220.1-201ENST00000434628 355 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 CST9LP2-201ENST00000437612 320 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 RPS12P18-201ENST00000442381 270 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 MTATP8P1-201ENST00000467115 207 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 AC010655.3-201ENST00000478818 450 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 AC008413.1-201ENST00000511864 177 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 AC093023.1-201ENST00000547375 507 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 AC079600.2-201ENST00000550076 130 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 AC008269.2-201ENST00000561915 1105 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 UBL5P4-201ENST00000562584 236 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 AC105245.1-201ENST00000581934 244 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 MIR3199-1-201ENST00000582434 88 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 U6.92-201ENST00000636464 89 ntBASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PTCH2Q9Y6C5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PTCH2Q9Y6C5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.42□□□□□ -1.86
PTCH2Q9Y6C5 Y_RNA.144-201ENST00000363521 113 ntBASIC3.42□□□□□ -1.86
PTCH2Q9Y6C5 Y_RNA.176-201ENST00000363815 109 ntBASIC3.42□□□□□ -1.86
PTCH2Q9Y6C5 Y_RNA.210-201ENST00000364161 110 ntBASIC3.42□□□□□ -1.86
PTCH2Q9Y6C5 MIR487A-201ENST00000385009 80 ntBASIC3.42□□□□□ -1.86
PTCH2Q9Y6C5 MIR1302-3-201ENST00000408128 138 ntBASIC3.42□□□□□ -1.86
PTCH2Q9Y6C5 RPL30P4-201ENST00000429309 333 ntBASIC3.42□□□□□ -1.86
PTCH2Q9Y6C5 BX679664.1-201ENST00000434429 253 ntBASIC3.42□□□□□ -1.86
PTCH2Q9Y6C5 SNORD109B-201ENST00000458961 67 ntBASIC3.42□□□□□ -1.86
PTCH2Q9Y6C5 SNORD109A-201ENST00000459128 67 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms