Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SNORA70.10-201ENST00000384515 134 ntBASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU7-171P-201ENST00000459581 62 ntBASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 NDUFA4P2-201ENST00000489989 244 ntBASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 RN7SKP282-201ENST00000516824 299 ntBASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 MIR4284-201ENST00000578924 81 ntBASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 MIR3117-201ENST00000584034 78 ntBASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA4Q9Y5G9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU1-22P-201ENST00000363334 158 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6-1099P-201ENST00000363533 107 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6-776P-201ENST00000364403 104 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 RNU6-1022P-201ENST00000365049 104 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 U8.17-201ENST00000391292 132 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 RNA5SP113-201ENST00000410486 84 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 AC023141.4-201ENST00000412031 328 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 RPL18P10-201ENST00000425606 538 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 AL691482.1-201ENST00000453255 87 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 RPS17P2-201ENST00000461663 408 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 Y_RNA.666-201ENST00000516187 112 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 HIGD1AP1-201ENST00000550979 275 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 ATP5J2P6-201ENST00000565203 266 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 AL391358.1-201ENST00000605342 190 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 FAM27D1-201ENST00000612308 341 ntBASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA4Q9Y5G9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 MAPK10-263ENST00000641052 4307 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 AC010680.1-201ENST00000590024 3590 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU6-349P-201ENST00000362402 107 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU6-944P-201ENST00000364023 107 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 SNORA70.2-201ENST00000364506 135 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 MIR548A2-201ENST00000384956 97 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU6-644P-201ENST00000391155 98 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 AC096949.1-201ENST00000412047 152 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 AC016717.1-201ENST00000448918 286 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU7-164P-201ENST00000459221 62 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 RN7SL319P-201ENST00000480656 221 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU6-162P-201ENST00000516228 103 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 AC109329.2-201ENST00000519658 482 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 AC068657.1-201ENST00000520807 306 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 TOMM20P2-201ENST00000540082 421 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 MIR376A2-201ENST00000636782 80 ntBASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA4Q9Y5G9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU6-50P-201ENST00000362356 103 ntBASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 SNORD116-22-201ENST00000384430 92 ntBASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 RNU6-750P-201ENST00000390946 107 ntBASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 RNA5SP332-201ENST00000391063 115 ntBASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 RNA5SP239-201ENST00000410218 129 ntBASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 SNRPGP13-201ENST00000442212 177 ntBASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 RPS29P21-201ENST00000496272 170 ntBASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 AC006504.1-201ENST00000562493 3666 ntBASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 AC011944.2-201ENST00000624440 683 ntBASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA4Q9Y5G9 SCN1A-220ENST00000641603 12506 ntBASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHGA4Q9Y5G9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms