Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 HSPE1P7-201ENST00000604681 321 ntBASIC4.29□□□□□ -1.72
PRDM9Q9NQV7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.29□□□□□ -1.72
PRDM9Q9NQV7 AC134878.1-201ENST00000619901 243 ntBASIC4.29□□□□□ -1.72
PRDM9Q9NQV7 AP005019.3-201ENST00000620418 560 ntBASIC4.29□□□□□ -1.72
PRDM9Q9NQV7 AC091905.2-201ENST00000623143 306 ntBASIC4.29□□□□□ -1.72
PRDM9Q9NQV7 AC010889.1-201ENST00000566193 2666 ntBASIC4.29□□□□□ -1.72
PRDM9Q9NQV7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.29□□□□□ -1.72
PRDM9Q9NQV7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRDM9Q9NQV7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.29□□□□□ -1.72
PRDM9Q9NQV7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 AC092435.4-201ENST00000623012 4159 ntBASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 AC027290.2-201ENST00000623210 18662 ntBASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 SNORA63.5-201ENST00000363548 123 ntBASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 RNU6-1209P-201ENST00000363655 107 ntBASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 Y_RNA.486-201ENST00000384398 107 ntBASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 MIR129-1-201ENST00000384972 72 ntBASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 RPL23AP48-201ENST00000406913 488 ntBASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 AC080013.2-201ENST00000460866 323 ntBASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 RN7SL41P-201ENST00000476144 297 ntBASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 MIR3690-201ENST00000580266 75 ntBASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 AC002064.3-201ENST00000623448 346 ntBASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 AC010300.1-201ENST00000600671 5134 ntBASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PRDM9Q9NQV7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.73
PRDM9Q9NQV7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 RNA5SP307-201ENST00000362863 116 ntBASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 RNY4P6-201ENST00000363667 96 ntBASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 Y_RNA.198-201ENST00000364013 98 ntBASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 RPS12P10-201ENST00000427031 377 ntBASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 RPL23AP93-201ENST00000440847 484 ntBASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 snoU13.1-201ENST00000459157 104 ntBASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 AP002884.2-201ENST00000471647 395 ntBASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 RN7SL817P-201ENST00000480777 288 ntBASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 AC079598.5-201ENST00000547460 117 ntBASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 AC022655.2-201ENST00000577280 318 ntBASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 MIR3129-201ENST00000581095 76 ntBASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRDM9Q9NQV7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 RNU1-20P-201ENST00000363314 162 ntBASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 SNORD14D-201ENST00000384390 87 ntBASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 MIR590-201ENST00000385008 97 ntBASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 RNA5SP372-201ENST00000390836 115 ntBASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 SNORD78.1-201ENST00000390866 65 ntBASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 AL590004.2-201ENST00000404787 371 ntBASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 AC008134.1-201ENST00000420943 193 ntBASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 AC006463.2-201ENST00000473326 348 ntBASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 IGKV3-31-201ENST00000523109 329 ntBASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 FAM27D1-201ENST00000612308 341 ntBASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 AF117829.1-206ENST00000621883 3802 ntBASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRDM9Q9NQV7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 Y_RNA.362-201ENST00000365518 110 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 Y_RNA.366-201ENST00000365540 102 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 RNA5SP151-201ENST00000365632 117 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 RNU6-573P-201ENST00000383938 106 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 SNORA56-201ENST00000383966 129 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 MIR659-201ENST00000384963 97 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 RNU2-49P-201ENST00000410666 184 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 RNU6-57P-201ENST00000411348 103 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 RPEP3-201ENST00000425462 676 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 MTATP8P2-201ENST00000435212 202 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 RPS4XP11-201ENST00000446897 772 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 AC012671.1-201ENST00000451912 203 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 RNA5SP310-201ENST00000459084 116 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 AP000873.1-201ENST00000463987 400 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 RN7SL459P-201ENST00000481078 302 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 MIR4715-201ENST00000584117 79 ntBASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.25□□□□□ -1.73
PRDM9Q9NQV7 SNORD115-40-201ENST00000606510 82 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms