Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 RNA5SP54-201ENST00000516951 92 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 EIF4BP1-201ENST00000554881 351 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 uc_338.14-201ENST00000613162 166 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 SNORD98-201ENST00000636377 67 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 GABRG2-229ENST00000641017 3628 ntBASIC2.9□□□□□ -1.95
AMBRA1Q9C0C7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 Y_RNA.105-201ENST00000363182 111 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 Y_RNA.143-201ENST00000363520 106 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 MIR767-201ENST00000390228 109 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-121P-201ENST00000410525 99 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 RPS26P42-201ENST00000413485 326 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 SNORD127-201ENST00000458892 86 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 AP001324.2-201ENST00000461163 319 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 RN7SL429P-201ENST00000479090 223 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 AC098869.1-201ENST00000481627 292 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 RN7SL489P-201ENST00000486185 223 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 RN7SL327P-201ENST00000488659 223 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 RPS27P26-201ENST00000494583 239 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 HMGB1P35-201ENST00000503360 598 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 AC025465.3-201ENST00000510570 311 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 UBL5P4-201ENST00000562584 236 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 CYP4A27P-201ENST00000567218 190 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 MIR5680-201ENST00000577577 84 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 MIR3923-201ENST00000579521 83 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 MIR7106-201ENST00000612419 65 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 MIR7112-201ENST00000616126 65 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 RN7SL853P-201ENST00000617250 223 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 AC010615.1-201ENST00000594254 1764 ntBASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.89□□□□□ -1.95
AMBRA1Q9C0C7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-280P-201ENST00000364145 104 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-301P-201ENST00000384277 107 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 Y_RNA.483-201ENST00000384380 101 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 SNORD115-46-201ENST00000390982 71 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-1093P-201ENST00000391194 107 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 AL079342.1-201ENST00000401460 267 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 AL357075.1-201ENST00000404107 726 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 RNU4-47P-201ENST00000410876 114 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 Z75741.1-201ENST00000446793 314 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 snoU13.14-201ENST00000459372 104 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 RPL36AP48-201ENST00000485521 314 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 RNU2-53P-201ENST00000516257 147 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 RNA5SP76-201ENST00000516277 87 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 RN7SKP49-201ENST00000516675 260 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-570P-201ENST00000517051 105 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 AC023824.2-201ENST00000566185 400 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 MIR5695-201ENST00000579717 85 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 AC090425.1-201ENST00000610007 140 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 LINC02555-201ENST00000563933 1951 ntBASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.88□□□□□ -1.95
AMBRA1Q9C0C7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 Y_RNA.307-201ENST00000365022 117 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-926P-201ENST00000384075 107 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 MIR329-1-201ENST00000385028 80 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 MRPL35P1-201ENST00000404272 572 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 SNORD12B-201ENST00000410433 91 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 RNA5SP344-201ENST00000411081 104 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 AIMP1P2-201ENST00000425294 312 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 AC009414.1-201ENST00000427200 443 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 AL353705.1-201ENST00000433468 480 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-1132P-201ENST00000459214 107 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 AC112771.1-201ENST00000463581 102 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 AC007215.1-201ENST00000464893 276 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 AC109925.1-201ENST00000478069 331 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 RN7SL20P-201ENST00000488827 297 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-794P-201ENST00000517261 64 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 AC023157.2-201ENST00000540596 141 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 MIR5004-201ENST00000579078 107 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 AC011476.5-201ENST00000615594 130 ntBASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
AMBRA1Q9C0C7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 AL109809.4-201ENST00000603520 2185 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 Y_RNA.40-201ENST00000362645 93 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 SNORA5B-201ENST00000363786 132 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-1318P-201ENST00000365389 103 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-1145P-201ENST00000384246 107 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 MIR186-201ENST00000384988 86 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms