Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MIR218-1-201ENST00000384999 110 ntBASIC4.16□□□□□ -1.74
CALR3Q96L12 MIR199A2-201ENST00000385289 110 ntBASIC4.16□□□□□ -1.74
CALR3Q96L12 DNAJC19P7-201ENST00000428811 344 ntBASIC4.16□□□□□ -1.74
CALR3Q96L12 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.16□□□□□ -1.74
CALR3Q96L12 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.16□□□□□ -1.74
CALR3Q96L12 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.16□□□□□ -1.74
CALR3Q96L12 U8.19-201ENST00000459095 133 ntBASIC4.16□□□□□ -1.74
CALR3Q96L12 RNU7-57P-201ENST00000459540 60 ntBASIC4.16□□□□□ -1.74
CALR3Q96L12 RPL27AP5-201ENST00000469428 449 ntBASIC4.16□□□□□ -1.74
CALR3Q96L12 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.16□□□□□ -1.74
CALR3Q96L12 AC109329.2-201ENST00000519658 482 ntBASIC4.16□□□□□ -1.74
CALR3Q96L12 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.16□□□□□ -1.74
CALR3Q96L12 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.16□□□□□ -1.74
CALR3Q96L12 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.16□□□□□ -1.74
CALR3Q96L12 MRPS18CP4-201ENST00000535821 231 ntBASIC4.16□□□□□ -1.74
CALR3Q96L12 AC090877.1-201ENST00000561418 344 ntBASIC4.16□□□□□ -1.74
CALR3Q96L12 MIR3199-1-201ENST00000582434 88 ntBASIC4.16□□□□□ -1.74
CALR3Q96L12 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.16□□□□□ -1.74
CALR3Q96L12 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.16□□□□□ -1.74
CALR3Q96L12 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CALR3Q96L12 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.16□□□□□ -1.74
CALR3Q96L12 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CALR3Q96L12 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.16□□□□□ -1.74
CALR3Q96L12 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CALR3Q96L12 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.15□□□□□ -1.74
CALR3Q96L12 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.15□□□□□ -1.74
CALR3Q96L12 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
CALR3Q96L12 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CALR3Q96L12 MFSD8-236ENST00000641509 4050 ntBASIC4.15□□□□□ -1.74
CALR3Q96L12 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
CALR3Q96L12 Y_RNA.287-201ENST00000364853 94 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 Y_RNA.368-201ENST00000365547 113 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 AL139095.1-201ENST00000404326 391 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 AL135790.2-201ENST00000437701 267 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 RPS29P12-201ENST00000460178 152 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 RNU6-1219P-201ENST00000516143 112 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 Y_RNA.703-201ENST00000516846 111 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 AC105245.1-201ENST00000581934 244 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 MIR3133-201ENST00000583157 78 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 AC023043.3-201ENST00000593113 385 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 AL133393.1-201ENST00000603277 287 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 AC099778.2-201ENST00000610904 211 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 MIR6868-201ENST00000611215 58 ntBASIC4.15□□□□□ -1.75
CALR3Q96L12 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CALR3Q96L12 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CALR3Q96L12 RNA5SP443-201ENST00000363083 132 ntBASIC4.14□□□□□ -1.75
CALR3Q96L12 RNA5SP399-201ENST00000364003 117 ntBASIC4.14□□□□□ -1.75
CALR3Q96L12 SNORA68.1-201ENST00000364537 132 ntBASIC4.14□□□□□ -1.75
CALR3Q96L12 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CALR3Q96L12 Y_RNA.456-201ENST00000384232 111 ntBASIC4.14□□□□□ -1.75
CALR3Q96L12 RNU6-855P-201ENST00000410395 104 ntBASIC4.14□□□□□ -1.75
CALR3Q96L12 AL691449.1-201ENST00000426570 421 ntBASIC4.14□□□□□ -1.75
CALR3Q96L12 RNU6-406P-201ENST00000516470 107 ntBASIC4.14□□□□□ -1.75
CALR3Q96L12 AP003730.1-201ENST00000524605 285 ntBASIC4.14□□□□□ -1.75
CALR3Q96L12 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.14□□□□□ -1.75
CALR3Q96L12 AC069294.1-201ENST00000608397 350 ntBASIC4.14□□□□□ -1.75
CALR3Q96L12 Mico1.1-201ENST00000611698 204 ntBASIC4.14□□□□□ -1.75
CALR3Q96L12 AC114781.5-201ENST00000615297 108 ntBASIC4.14□□□□□ -1.75
CALR3Q96L12 AC013791.1-201ENST00000616619 62 ntBASIC4.14□□□□□ -1.75
CALR3Q96L12 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.14□□□□□ -1.75
CALR3Q96L12 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CALR3Q96L12 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.13□□□□□ -1.75
CALR3Q96L12 Y_RNA.7-201ENST00000362352 102 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 SNORD114-7-201ENST00000362520 77 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 SNORD31B-201ENST00000364977 69 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 Y_RNA.341-201ENST00000365341 102 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 RNU4-17P-201ENST00000365598 141 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 AP002088.1-201ENST00000382740 395 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 Y_RNA.571-201ENST00000384753 98 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 SNORA26.5-201ENST00000391215 123 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.13□□□□□ -1.75
CALR3Q96L12 RPL37P18-201ENST00000411602 243 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.13□□□□□ -1.75
CALR3Q96L12 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.13□□□□□ -1.75
CALR3Q96L12 ATP5EP1-201ENST00000510257 156 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 RNA5SP164-201ENST00000516533 110 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 YPEL5P3-201ENST00000547227 352 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 RN7SL703P-201ENST00000578485 302 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.13□□□□□ -1.75
CALR3Q96L12 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.13□□□□□ -1.75
CALR3Q96L12 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CALR3Q96L12 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CALR3Q96L12 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CALR3Q96L12 AC103988.1-201ENST00000566382 2177 ntBASIC4.13□□□□□ -1.75
CALR3Q96L12 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CALR3Q96L12 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CALR3Q96L12 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CALR3Q96L12 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.12□□□□□ -1.75
CALR3Q96L12 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CALR3Q96L12 AC058791.1-201ENST00000608412 3198 ntBASIC4.12□□□□□ -1.75
CALR3Q96L12 SNORA72.4-201ENST00000384174 132 ntBASIC4.12□□□□□ -1.75
CALR3Q96L12 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.12□□□□□ -1.75
CALR3Q96L12 AC091021.1-201ENST00000468051 388 ntBASIC4.12□□□□□ -1.75
CALR3Q96L12 AC006463.2-201ENST00000473326 348 ntBASIC4.12□□□□□ -1.75
CALR3Q96L12 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.12□□□□□ -1.75
CALR3Q96L12 SUMO2P18-201ENST00000518873 252 ntBASIC4.12□□□□□ -1.75
CALR3Q96L12 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CALR3Q96L12 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms