Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 HIF1AP1-201ENST00000553642 175 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 CYP4A27P-201ENST00000567218 190 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 MIR5583-1-201ENST00000580941 59 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 MIR4661-201ENST00000582720 75 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 Z98751.3-201ENST00000604447 521 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 RNU6-85P-201ENST00000605989 107 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 RNU6-112P-201ENST00000363599 104 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 SNORA12.2-201ENST00000391040 156 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 RNU6-174P-201ENST00000410406 106 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 AP000275.1-201ENST00000411943 390 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 CYCSP49-201ENST00000420810 319 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 AL121890.1-201ENST00000435457 205 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 RNU7-180P-201ENST00000459240 63 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 TOMM22P6-201ENST00000465035 409 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 AC097473.1-201ENST00000508142 408 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 SNORD116-28-201ENST00000516123 91 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 MIR4528-201ENST00000577763 90 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 RPL17P51-201ENST00000605218 238 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 AC005520.5-201ENST00000613926 164 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 SNORA43.4-201ENST00000629559 138 ntBASIC1.34□□□□□ -2.19
PKNOX2Q96KN3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.34□□□□□ -2.2
PKNOX2Q96KN3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
PKNOX2Q96KN3 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 SNORD31B-201ENST00000364977 69 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 EBAG9P1-201ENST00000418955 543 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 MTCYBP8-201ENST00000422855 651 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 MTCO2P3-201ENST00000442543 421 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 RNU7-63P-201ENST00000459054 62 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 RNU7-14P-201ENST00000459331 62 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 ARL2BPP4-201ENST00000506854 471 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 MIR5094-201ENST00000578766 85 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 MIR3937-201ENST00000580135 106 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 AC087752.4-201ENST00000605911 462 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 AC009994.1-201ENST00000606889 253 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 AC063944.3-201ENST00000609969 533 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 AC073114.1-201ENST00000612027 490 ntBASIC1.33□□□□□ -2.2
PKNOX2Q96KN3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 RNU1-76P-201ENST00000362903 159 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 RNA5SP190-201ENST00000365222 118 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 RNU6-996P-201ENST00000365438 107 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 RNU5A-6P-201ENST00000384136 116 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 SNORA36A-201ENST00000384221 132 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 RNU6-296P-201ENST00000384608 107 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 SNORA67.5-201ENST00000391036 107 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 RPL23AP36-201ENST00000413895 458 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 BTF3P4-201ENST00000418852 495 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 AC010095.1-201ENST00000443543 144 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 USP9YP29-201ENST00000445112 563 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 AC073415.1-201ENST00000449240 153 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 AC016925.1-201ENST00000458303 298 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 SNORD13-201ENST00000459299 104 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 RPL36AP21-201ENST00000490372 323 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 RNU6-548P-201ENST00000517083 115 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 SUMO2P18-201ENST00000518873 252 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 AP003033.1-201ENST00000527244 415 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 AC064807.4-201ENST00000607201 407 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 MIR6715A-201ENST00000615929 79 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 AL136221.1-201ENST00000621449 509 ntBASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.32□□□□□ -2.2
PKNOX2Q96KN3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 RNU6-1103P-201ENST00000384150 107 ntBASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 MIR1289-2-201ENST00000408360 111 ntBASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 POLR2J4-204ENST00000418424 324 ntBASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 AC012306.1-201ENST00000423267 114 ntBASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 AL133373.1-201ENST00000497098 94 ntBASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 MTCYBP18-201ENST00000501056 747 ntBASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 AC010493.1-201ENST00000513479 292 ntBASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 AC104984.5-201ENST00000586878 94 ntBASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 AC121247.2-201ENST00000604776 136 ntBASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 uc_338.34-201ENST00000617467 174 ntBASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.31□□□□□ -2.2
PKNOX2Q96KN3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms