Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
TRIM11Q96F44 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM11Q96F44 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM11Q96F44 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM11Q96F44 SNORA18.3-201ENST00000384122 132 ntBASIC4.09□□□□□ -1.75
TRIM11Q96F44 Y_RNA.456-201ENST00000384232 111 ntBASIC4.09□□□□□ -1.75
TRIM11Q96F44 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM11Q96F44 snoU13.4-201ENST00000458916 104 ntBASIC4.09□□□□□ -1.75
TRIM11Q96F44 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM11Q96F44 RNA5SP164-201ENST00000516533 110 ntBASIC4.09□□□□□ -1.75
TRIM11Q96F44 RN7SKP209-201ENST00000516888 304 ntBASIC4.09□□□□□ -1.75
TRIM11Q96F44 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.09□□□□□ -1.75
TRIM11Q96F44 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM11Q96F44 AL137849.1-201ENST00000604767 169 ntBASIC4.09□□□□□ -1.75
TRIM11Q96F44 AC004832.5-201ENST00000608677 401 ntBASIC4.09□□□□□ -1.75
TRIM11Q96F44 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.09□□□□□ -1.75
TRIM11Q96F44 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM11Q96F44 AC112484.5-201ENST00000624189 228 ntBASIC4.09□□□□□ -1.75
TRIM11Q96F44 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM11Q96F44 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM11Q96F44 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM11Q96F44 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM11Q96F44 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM11Q96F44 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TRIM11Q96F44 AC126755.2-208ENST00000327792 462 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 AC138969.1-213ENST00000331436 462 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 MIR367-201ENST00000362299 68 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 RNU6-144P-201ENST00000383951 107 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 RNY3P5-201ENST00000384127 102 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 MIR549A-201ENST00000385268 96 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 SNORA26.2-201ENST00000390922 122 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 RPL21P65-201ENST00000406094 466 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 RNU6-855P-201ENST00000410395 104 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 AC245047.4-201ENST00000433189 144 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 AC009237.8-201ENST00000445492 379 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 RPL26P9-201ENST00000457466 433 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 RNU7-141P-201ENST00000459304 62 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 RN7SL93P-201ENST00000463035 293 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM11Q96F44 AC091152.2-201ENST00000591628 2569 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 MIR6867-201ENST00000610636 67 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 XIST_intron.1-201ENST00000619444 68 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 AL121890.5-201ENST00000620848 304 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 AC106754.2-201ENST00000623006 233 ntBASIC4.08□□□□□ -1.76
TRIM11Q96F44 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM11Q96F44 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM11Q96F44 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM11Q96F44 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.07□□□□□ -1.76
TRIM11Q96F44 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TRIM11Q96F44 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM11Q96F44 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM11Q96F44 U8.6-201ENST00000364939 135 ntBASIC4.07□□□□□ -1.76
TRIM11Q96F44 RNU1-100P-201ENST00000365255 165 ntBASIC4.07□□□□□ -1.76
TRIM11Q96F44 Y_RNA.341-201ENST00000365341 102 ntBASIC4.07□□□□□ -1.76
TRIM11Q96F44 SNORA62-201ENST00000365493 153 ntBASIC4.07□□□□□ -1.76
TRIM11Q96F44 RNY4P29-201ENST00000410801 97 ntBASIC4.07□□□□□ -1.76
TRIM11Q96F44 CRYBB2P1-203ENST00000415709 538 ntBASIC4.07□□□□□ -1.76
TRIM11Q96F44 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM11Q96F44 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM11Q96F44 HMGN2P16-201ENST00000456802 261 ntBASIC4.07□□□□□ -1.76
TRIM11Q96F44 TRBV12-2-201ENST00000489763 344 ntBASIC4.07□□□□□ -1.76
TRIM11Q96F44 CKS1BP7-201ENST00000522230 235 ntBASIC4.07□□□□□ -1.76
TRIM11Q96F44 AC120024.3-201ENST00000603167 156 ntBASIC4.07□□□□□ -1.76
TRIM11Q96F44 AL591034.3-201ENST00000605511 685 ntBASIC4.07□□□□□ -1.76
TRIM11Q96F44 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM11Q96F44 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM11Q96F44 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM11Q96F44 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM11Q96F44 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM11Q96F44 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM11Q96F44 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM11Q96F44 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM11Q96F44 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM11Q96F44 RNU1-18P-201ENST00000363062 164 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 RNU6-1164P-201ENST00000364428 107 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 Y_RNA.310-201ENST00000365063 113 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 SNORD58C-201ENST00000365223 64 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 SNORA20B-201ENST00000384220 132 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 AL512604.1-201ENST00000404812 257 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 CYCSP49-201ENST00000420810 319 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM11Q96F44 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM11Q96F44 RNU1-103P-201ENST00000516502 125 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 RNU6-107P-201ENST00000516643 102 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 SNORA31.23-201ENST00000517219 133 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 MIR4700-201ENST00000578311 74 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 SNRPGP20-201ENST00000604477 205 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 uc_338.28-201ENST00000612082 187 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 MIR6134-201ENST00000617606 109 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 AC244205.2-202ENST00000635781 342 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM11Q96F44 AC138915.1-201ENST00000565427 1685 ntBASIC4.06□□□□□ -1.76
TRIM11Q96F44 AC022336.2-201ENST00000568966 2538 ntBASIC4.05□□□□□ -1.76
TRIM11Q96F44 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
TRIM11Q96F44 Y_RNA.114-201ENST00000363265 113 ntBASIC4.05□□□□□ -1.76
TRIM11Q96F44 Y_RNA.120-201ENST00000363304 110 ntBASIC4.05□□□□□ -1.76
TRIM11Q96F44 RNU6-294P-201ENST00000364999 102 ntBASIC4.05□□□□□ -1.76
TRIM11Q96F44 Y_RNA.415-201ENST00000384012 112 ntBASIC4.05□□□□□ -1.76
TRIM11Q96F44 RNU6-140P-201ENST00000384566 108 ntBASIC4.05□□□□□ -1.76
TRIM11Q96F44 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms