Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 Y_RNA.666-201ENST00000516187 112 ntBASIC4.75□□□□□ -1.65
PTCD2Q8WV60 Vault.1-201ENST00000516474 102 ntBASIC4.75□□□□□ -1.65
PTCD2Q8WV60 SUMO2P16-201ENST00000519475 264 ntBASIC4.75□□□□□ -1.65
PTCD2Q8WV60 MIR4438-201ENST00000585271 93 ntBASIC4.75□□□□□ -1.65
PTCD2Q8WV60 AC007229.1-201ENST00000590455 412 ntBASIC4.75□□□□□ -1.65
PTCD2Q8WV60 AP000346.3-201ENST00000622821 210 ntBASIC4.75□□□□□ -1.65
PTCD2Q8WV60 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCD2Q8WV60 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.75□□□□□ -1.65
PTCD2Q8WV60 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTCD2Q8WV60 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTCD2Q8WV60 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.74□□□□□ -1.65
PTCD2Q8WV60 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTCD2Q8WV60 RNA5SP28-201ENST00000363841 119 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 Y_RNA.290-201ENST00000364879 114 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 MT-TI-201ENST00000387365 69 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 RNU1-82P-201ENST00000390851 165 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 U8.17-201ENST00000391292 132 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 RNA5SP146-201ENST00000410743 123 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 CRYBB2P1-203ENST00000415709 538 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 RN7SL354P-201ENST00000469282 294 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 AC097462.1-201ENST00000514125 324 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 RN7SKP282-201ENST00000516824 299 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 AC015912.2-201ENST00000571053 181 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 MIR6780A-201ENST00000615089 68 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 AC140113.4-201ENST00000622087 222 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 AC090517.3-201ENST00000625170 141 ntBASIC4.74□□□□□ -1.65
PTCD2Q8WV60 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTCD2Q8WV60 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.74□□□□□ -1.65
PTCD2Q8WV60 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTCD2Q8WV60 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTCD2Q8WV60 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTCD2Q8WV60 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTCD2Q8WV60 USP8P1-201ENST00000494673 3183 ntBASIC4.73□□□□□ -1.65
PTCD2Q8WV60 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.73□□□□□ -1.65
PTCD2Q8WV60 MIR1912-201ENST00000410389 80 ntBASIC4.73□□□□□ -1.65
PTCD2Q8WV60 Z74021.1-201ENST00000423610 407 ntBASIC4.73□□□□□ -1.65
PTCD2Q8WV60 RN7SL738P-201ENST00000470264 297 ntBASIC4.73□□□□□ -1.65
PTCD2Q8WV60 NDUFA4P2-201ENST00000489989 244 ntBASIC4.73□□□□□ -1.65
PTCD2Q8WV60 RPL21P129-201ENST00000491732 478 ntBASIC4.73□□□□□ -1.65
PTCD2Q8WV60 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.73□□□□□ -1.65
PTCD2Q8WV60 PPBPP1-201ENST00000510807 373 ntBASIC4.73□□□□□ -1.65
PTCD2Q8WV60 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.73□□□□□ -1.65
PTCD2Q8WV60 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.73□□□□□ -1.65
PTCD2Q8WV60 AC022254.1-201ENST00000567857 235 ntBASIC4.73□□□□□ -1.65
PTCD2Q8WV60 MIR3163-201ENST00000581592 73 ntBASIC4.73□□□□□ -1.65
PTCD2Q8WV60 AC209154.1-201ENST00000582156 337 ntBASIC4.73□□□□□ -1.65
PTCD2Q8WV60 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCD2Q8WV60 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCD2Q8WV60 SCN1A-220ENST00000641603 12506 ntBASIC4.73□□□□□ -1.65
PTCD2Q8WV60 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCD2Q8WV60 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCD2Q8WV60 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.73□□□□□ -1.65
PTCD2Q8WV60 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCD2Q8WV60 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCD2Q8WV60 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCD2Q8WV60 MAPK10-303ENST00000641324 3959 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
PTCD2Q8WV60 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTCD2Q8WV60 AC080128.1-201ENST00000474389 1917 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 AC000403.1-201ENST00000613696 3585 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.72□□□□□ -1.65
PTCD2Q8WV60 Y_RNA.298-201ENST00000364960 107 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 RNU6-816P-201ENST00000390914 107 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 RNU6-1268P-201ENST00000391214 107 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 RNU6-1239P-201ENST00000391310 107 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 AL513477.1-202ENST00000417061 214 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 SNRPGP13-201ENST00000442212 177 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 RNU7-70P-201ENST00000516941 66 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 RN7SKP289-201ENST00000517244 295 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 AC068657.1-201ENST00000520807 306 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.72□□□□□ -1.65
PTCD2Q8WV60 AC079598.5-201ENST00000547460 117 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 AC105129.1-201ENST00000560250 297 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.72□□□□□ -1.65
PTCD2Q8WV60 RN7SL703P-201ENST00000578485 302 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 MIR5197-201ENST00000583721 112 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 RN7SL722P-201ENST00000617780 284 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 RN7SL565P-201ENST00000618246 284 ntBASIC4.72□□□□□ -1.65
PTCD2Q8WV60 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTCD2Q8WV60 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PTCD2Q8WV60 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
PTCD2Q8WV60 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PTCD2Q8WV60 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCD2Q8WV60 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.71□□□□□ -1.66
PTCD2Q8WV60 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PTCD2Q8WV60 Y_RNA.242-201ENST00000364473 110 ntBASIC4.71□□□□□ -1.66
PTCD2Q8WV60 RNU6-418P-201ENST00000384035 107 ntBASIC4.71□□□□□ -1.66
PTCD2Q8WV60 MIR192-201ENST00000384915 110 ntBASIC4.71□□□□□ -1.66
PTCD2Q8WV60 AC109329.2-201ENST00000519658 482 ntBASIC4.71□□□□□ -1.66
PTCD2Q8WV60 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCD2Q8WV60 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTCD2Q8WV60 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCD2Q8WV60 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTCD2Q8WV60 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTCD2Q8WV60 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCD2Q8WV60 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTCD2Q8WV60 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
PTCD2Q8WV60 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms