Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 AC096949.1-201ENST00000412047 152 ntBASIC4.21□□□□□ -1.74
FOXC1Q12948 AC097462.1-201ENST00000514125 324 ntBASIC4.21□□□□□ -1.74
FOXC1Q12948 RNU7-61P-201ENST00000515897 61 ntBASIC4.21□□□□□ -1.74
FOXC1Q12948 RN7SKP209-201ENST00000516888 304 ntBASIC4.21□□□□□ -1.74
FOXC1Q12948 AC040958.1-201ENST00000561102 201 ntBASIC4.21□□□□□ -1.74
FOXC1Q12948 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.21□□□□□ -1.74
FOXC1Q12948 AL592437.2-201ENST00000421655 2434 ntBASIC4.21□□□□□ -1.74
FOXC1Q12948 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
FOXC1Q12948 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXC1Q12948 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
FOXC1Q12948 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXC1Q12948 RNU6-1099P-201ENST00000363533 107 ntBASIC4.2□□□□□ -1.74
FOXC1Q12948 SNORA73.2-201ENST00000364946 201 ntBASIC4.2□□□□□ -1.74
FOXC1Q12948 SNORD24-201ENST00000383884 75 ntBASIC4.2□□□□□ -1.74
FOXC1Q12948 Y_RNA.601-201ENST00000410500 113 ntBASIC4.2□□□□□ -1.74
FOXC1Q12948 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXC1Q12948 RNU7-57P-201ENST00000459540 60 ntBASIC4.2□□□□□ -1.74
FOXC1Q12948 RNU6-221P-201ENST00000459541 99 ntBASIC4.2□□□□□ -1.74
FOXC1Q12948 RN7SL691P-201ENST00000494487 301 ntBASIC4.2□□□□□ -1.74
FOXC1Q12948 AC096725.1-201ENST00000514266 313 ntBASIC4.2□□□□□ -1.74
FOXC1Q12948 RNA5SP519-201ENST00000516480 119 ntBASIC4.2□□□□□ -1.74
FOXC1Q12948 AC107934.2-201ENST00000518653 310 ntBASIC4.2□□□□□ -1.74
FOXC1Q12948 IFITM8P-201ENST00000522529 394 ntBASIC4.2□□□□□ -1.74
FOXC1Q12948 AC107918.3-201ENST00000533272 382 ntBASIC4.2□□□□□ -1.74
FOXC1Q12948 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXC1Q12948 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXC1Q12948 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXC1Q12948 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
FOXC1Q12948 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXC1Q12948 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXC1Q12948 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXC1Q12948 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
FOXC1Q12948 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
FOXC1Q12948 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
FOXC1Q12948 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXC1Q12948 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXC1Q12948 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXC1Q12948 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXC1Q12948 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
FOXC1Q12948 RNU1-133P-201ENST00000364867 167 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 MIR181A2-201ENST00000384863 110 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 AL133475.1-201ENST00000404414 305 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 Z92545.1-201ENST00000411782 234 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXC1Q12948 RPS4XP11-201ENST00000446897 772 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 AC012671.1-201ENST00000451912 203 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 AC008155.2-201ENST00000464337 397 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 PPIAP15-201ENST00000479662 484 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 AC006272.2-201ENST00000594725 163 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 HSPE1P7-201ENST00000604681 321 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 AL121772.2-201ENST00000614331 297 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 U7.3-201ENST00000616123 62 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 MIR376A2-201ENST00000636782 80 ntBASIC4.19□□□□□ -1.74
FOXC1Q12948 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXC1Q12948 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXC1Q12948 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXC1Q12948 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXC1Q12948 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
FOXC1Q12948 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXC1Q12948 CPHL1P-201ENST00000461341 3407 ntBASIC4.18□□□□□ -1.74
FOXC1Q12948 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
FOXC1Q12948 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXC1Q12948 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXC1Q12948 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXC1Q12948 UBBP2-201ENST00000376781 231 ntBASIC4.18□□□□□ -1.74
FOXC1Q12948 Y_RNA.437-201ENST00000384113 113 ntBASIC4.18□□□□□ -1.74
FOXC1Q12948 SNORA12-201ENST00000391162 147 ntBASIC4.18□□□□□ -1.74
FOXC1Q12948 NDUFB4P4-201ENST00000404822 243 ntBASIC4.18□□□□□ -1.74
FOXC1Q12948 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.18□□□□□ -1.74
FOXC1Q12948 RPL39P25-201ENST00000449384 154 ntBASIC4.18□□□□□ -1.74
FOXC1Q12948 HSPE1P18-201ENST00000517602 280 ntBASIC4.18□□□□□ -1.74
FOXC1Q12948 MIR3124-201ENST00000582636 67 ntBASIC4.18□□□□□ -1.74
FOXC1Q12948 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXC1Q12948 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXC1Q12948 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
FOXC1Q12948 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXC1Q12948 AC073346.2-201ENST00000624724 2058 ntBASIC4.18□□□□□ -1.74
FOXC1Q12948 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXC1Q12948 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
FOXC1Q12948 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXC1Q12948 AC104623.2-202ENST00000623477 4002 ntBASIC4.18□□□□□ -1.74
FOXC1Q12948 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXC1Q12948 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
FOXC1Q12948 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
FOXC1Q12948 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXC1Q12948 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
FOXC1Q12948 AC004944.1-201ENST00000517807 3059 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXC1Q12948 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXC1Q12948 RNU6-349P-201ENST00000362402 107 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
FOXC1Q12948 RNU6-748P-201ENST00000384648 107 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 RNU6-1104P-201ENST00000384723 104 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 MIR548A2-201ENST00000384956 97 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 MIR34B-201ENST00000385076 84 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 MIR3065-201ENST00000390137 79 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 RNU6-644P-201ENST00000391155 98 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 MIR1912-201ENST00000410389 80 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.17□□□□□ -1.74
FOXC1Q12948 RNA5SP497-201ENST00000516081 97 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms