Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 Y_RNA.381-201ENST00000365666 102 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 SNORA36A-201ENST00000384221 132 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 Y_RNA.553-201ENST00000384670 102 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 AC090960.1-201ENST00000421072 306 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 AC073464.1-201ENST00000429823 534 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.33□□□□□ -2.2
CDH17Q12864 AC007547.1-201ENST00000462177 490 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 AC087477.1-201ENST00000465747 340 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 AC008628.2-201ENST00000502605 298 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 AC016632.1-201ENST00000503994 196 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.33□□□□□ -2.2
CDH17Q12864 AC010493.1-201ENST00000513479 292 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 HULC.1-201ENST00000612720 240 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 uc_338.34-201ENST00000617467 174 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 AC009509.4-201ENST00000619202 509 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 SNORA43.4-201ENST00000629559 138 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 MIR3974-201ENST00000637126 96 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CDH17Q12864 ELL2P3-201ENST00000457883 1602 ntBASIC1.33□□□□□ -2.2
CDH17Q12864 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDH17Q12864 U3.9-201ENST00000363823 204 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 RNU4-56P-201ENST00000364700 142 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 RNU6-378P-201ENST00000384324 107 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 Y_RNA.504-201ENST00000384481 104 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 SNORD73A-201ENST00000386062 65 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 RNU4-62P-201ENST00000410125 130 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 RNU2-41P-201ENST00000410991 178 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.32□□□□□ -2.2
CDH17Q12864 AC123900.1-201ENST00000420390 96 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 AC002486.1-201ENST00000435098 391 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.32□□□□□ -2.2
CDH17Q12864 MTCO2P18-201ENST00000457151 658 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.32□□□□□ -2.2
CDH17Q12864 RNU1-131P-201ENST00000458943 161 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.32□□□□□ -2.2
CDH17Q12864 HMGN1P13-201ENST00000505795 138 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 AC005741.1-201ENST00000511094 432 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 RPL39P5-202ENST00000512505 151 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.32□□□□□ -2.2
CDH17Q12864 MTND4P7-201ENST00000523876 130 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 AP003033.1-201ENST00000527244 415 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.32□□□□□ -2.2
CDH17Q12864 DNAJC19P9-201ENST00000555084 351 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.32□□□□□ -2.2
CDH17Q12864 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.32□□□□□ -2.2
CDH17Q12864 AC087683.1-201ENST00000591187 441 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 AC073648.5-201ENST00000603502 305 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 Z98751.3-201ENST00000604447 521 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 AC007684.1-201ENST00000609671 477 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.32□□□□□ -2.2
CDH17Q12864 AC245060.5-201ENST00000610778 3293 ntBASIC1.32□□□□□ -2.2
CDH17Q12864 Y_RNA.77-201ENST00000362962 107 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 Y_RNA.255-201ENST00000364581 97 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 SNORA12.2-201ENST00000391040 156 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 AP000275.1-201ENST00000411943 390 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 MTCO3P41-201ENST00000414801 328 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH17Q12864 AL606489.2-201ENST00000433886 234 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 MTCO2P3-201ENST00000442543 421 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 SNRPEP8-201ENST00000442866 260 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 AC245517.4-201ENST00000448601 281 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH17Q12864 RPS3AP17-201ENST00000472594 777 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH17Q12864 HMGB1P29-201ENST00000505659 499 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 AC079140.3-201ENST00000511111 550 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 AC091133.4-201ENST00000511142 308 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 RN7SKP298-201ENST00000515950 94 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.31□□□□□ -2.2
CDH17Q12864 EIF4A1P12-201ENST00000551910 141 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 AC008269.2-201ENST00000561915 1105 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH17Q12864 MIR4498-201ENST00000577599 66 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 MIR4781-201ENST00000585250 76 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 AC004223.2-201ENST00000590309 544 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 AL512598.1-201ENST00000610158 273 ntBASIC1.31□□□□□ -2.2
CDH17Q12864 Y_RNA.1-201ENST00000352915 104 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 Y_RNA.359-201ENST00000365498 102 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 RNA5SP219-201ENST00000390940 113 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 MIR1267-201ENST00000408723 78 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.3□□□□□ -2.2
CDH17Q12864 CDK8P2-201ENST00000415020 547 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 RPL30P13-201ENST00000418873 348 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 AC139712.2-201ENST00000424302 339 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.3□□□□□ -2.2
CDH17Q12864 AL121601.2-201ENST00000438019 707 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CDH17Q12864 RNU7-138P-201ENST00000459479 64 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 TOMM22P6-201ENST00000465035 409 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 AL163540.1-201ENST00000485382 386 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 AC010424.1-201ENST00000506336 297 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 AC108078.1-201ENST00000508073 725 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 AC010486.3-201ENST00000511602 785 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 RNA5SP445-201ENST00000515889 115 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 SNORA14.1-201ENST00000516113 141 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms