Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 RNU4-66P-201ENST00000365199 138 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 MIR597-201ENST00000384968 97 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 SNORA26.3-201ENST00000391119 136 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.51□□□□□ -2.17
SMARCB1Q12824 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCB1Q12824 AL590135.1-201ENST00000422215 156 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 AC019205.3-201ENST00000424573 156 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.51□□□□□ -2.17
SMARCB1Q12824 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCB1Q12824 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCB1Q12824 AC016700.2-201ENST00000446011 156 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 RNU7-138P-201ENST00000459479 64 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCB1Q12824 AC015911.1-201ENST00000495111 156 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCB1Q12824 AC093259.1-201ENST00000509755 300 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.51□□□□□ -2.17
SMARCB1Q12824 PTP4A1P4-201ENST00000512479 322 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 RNU6-189P-201ENST00000516120 101 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCB1Q12824 HSPE1P4-201ENST00000550617 308 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCB1Q12824 MIR3198-2-201ENST00000577868 80 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 MIR5692C1-201ENST00000585309 91 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 BNIP3P25-201ENST00000596023 559 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.51□□□□□ -2.17
SMARCB1Q12824 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.51□□□□□ -2.17
SMARCB1Q12824 AC092807.2-201ENST00000609367 243 ntBASIC1.51□□□□□ -2.17
SMARCB1Q12824 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SMARCB1Q12824 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 AL391987.6-201ENST00000305671 199 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 Y_RNA.372-201ENST00000365599 102 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 SNORD14D-201ENST00000384390 87 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SMARCB1Q12824 BTF3L4P2-201ENST00000392798 346 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 RN7SKP61-201ENST00000410642 295 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 RNU6-321P-201ENST00000410912 106 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 RNU6-1068P-201ENST00000410958 103 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 RNU6-1245P-201ENST00000411130 106 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.5□□□□□ -2.17
SMARCB1Q12824 AC004965.1-201ENST00000413033 213 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 AL589823.1-201ENST00000429577 183 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 AL133396.1-201ENST00000432048 687 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.5□□□□□ -2.17
SMARCB1Q12824 SNRPGP13-201ENST00000442212 177 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 RPS29P27-201ENST00000463711 170 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 SRRM1P2-201ENST00000464531 1192 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 Y_RNA.693-201ENST00000516641 110 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 Y_RNA.704-201ENST00000516851 102 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 AC069113.1-201ENST00000517763 267 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 AC104576.1-201ENST00000524225 88 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 AC115990.1-201ENST00000526957 301 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.5□□□□□ -2.17
SMARCB1Q12824 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.5□□□□□ -2.17
SMARCB1Q12824 AC024909.2-201ENST00000553035 286 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 MIR4713-201ENST00000582691 75 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.5□□□□□ -2.17
SMARCB1Q12824 FAM157A-202ENST00000615155 405 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 AP000560.1-201ENST00000624150 1937 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
SMARCB1Q12824 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
SMARCB1Q12824 MIR337-201ENST00000362281 93 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SMARCB1Q12824 RNU6-142P-201ENST00000384019 107 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 SNORD37.1-201ENST00000390968 65 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 MTCYBP2-201ENST00000407745 171 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.49□□□□□ -2.17
SMARCB1Q12824 TIMM9P3-201ENST00000428659 274 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 CBX3P6-201ENST00000430257 527 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 RNU6-1208P-201ENST00000459588 107 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 AC107401.1-201ENST00000503426 685 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 AC022447.4-201ENST00000504053 364 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 ATP5EP1-201ENST00000510257 156 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 AC005741.1-201ENST00000511094 432 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 AC025423.5-201ENST00000550230 219 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 TRAV32-201ENST00000553993 340 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.49□□□□□ -2.17
SMARCB1Q12824 MIR3941-201ENST00000582572 103 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 AC103810.8-201ENST00000607347 118 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 AC093783.1-201ENST00000612976 329 ntBASIC1.49□□□□□ -2.17
SMARCB1Q12824 MIR340-201ENST00000362125 95 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 RNU6-1085P-201ENST00000363576 107 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 RNU6-82P-201ENST00000363970 107 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 SNORD114-6-201ENST00000364393 72 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 RNU6-483P-201ENST00000384088 108 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 Y_RNA.436-201ENST00000384097 102 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 RNU6-1042P-201ENST00000384204 107 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 RNU6-378P-201ENST00000384324 107 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 AP000275.1-201ENST00000411943 390 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 EIF4EP2-201ENST00000422816 654 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 C8orf59P1-201ENST00000429930 303 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 MTCO2P3-201ENST00000442543 421 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 Y_RNA.654-201ENST00000497848 106 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.48□□□□□ -2.17
SMARCB1Q12824 TRMT112P2-201ENST00000512910 132 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.48□□□□□ -2.17
SMARCB1Q12824 MIR3136-201ENST00000583498 78 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.48□□□□□ -2.17
SMARCB1Q12824 Z98751.3-201ENST00000604447 521 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 AF250324.2-201ENST00000608299 610 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms