Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNA5SP167-201ENST00000365461 116 ntBASIC4.17□□□□□ -1.74
RXRBP28702 Z98749.2-208ENST00000381646 500 ntBASIC4.17□□□□□ -1.74
RXRBP28702 SNORA29-201ENST00000384183 140 ntBASIC4.17□□□□□ -1.74
RXRBP28702 SNORD20-201ENST00000384550 80 ntBASIC4.17□□□□□ -1.74
RXRBP28702 Y_RNA.629-201ENST00000411368 105 ntBASIC4.17□□□□□ -1.74
RXRBP28702 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.17□□□□□ -1.74
RXRBP28702 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.17□□□□□ -1.74
RXRBP28702 AL356867.1-201ENST00000429623 299 ntBASIC4.17□□□□□ -1.74
RXRBP28702 WARS2P1-201ENST00000429678 537 ntBASIC4.17□□□□□ -1.74
RXRBP28702 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.17□□□□□ -1.74
RXRBP28702 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.17□□□□□ -1.74
RXRBP28702 RN7SL93P-201ENST00000463035 293 ntBASIC4.17□□□□□ -1.74
RXRBP28702 AC010285.1-201ENST00000470580 392 ntBASIC4.17□□□□□ -1.74
RXRBP28702 AC078918.1-201ENST00000498515 228 ntBASIC4.17□□□□□ -1.74
RXRBP28702 AC108210.2-201ENST00000503681 201 ntBASIC4.17□□□□□ -1.74
RXRBP28702 AC083906.5-201ENST00000503722 328 ntBASIC4.17□□□□□ -1.74
RXRBP28702 SNORA43.2-201ENST00000516652 128 ntBASIC4.17□□□□□ -1.74
RXRBP28702 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.17□□□□□ -1.74
RXRBP28702 AP005660.1-201ENST00000522972 293 ntBASIC4.17□□□□□ -1.74
RXRBP28702 MED28P6-201ENST00000558776 231 ntBASIC4.17□□□□□ -1.74
RXRBP28702 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.17□□□□□ -1.74
RXRBP28702 AC055872.1-201ENST00000570978 278 ntBASIC4.17□□□□□ -1.74
RXRBP28702 U7.8-201ENST00000619968 63 ntBASIC4.17□□□□□ -1.74
RXRBP28702 SCARNA4-202ENST00000625402 129 ntBASIC4.17□□□□□ -1.74
RXRBP28702 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.17□□□□□ -1.74
RXRBP28702 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RXRBP28702 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.16□□□□□ -1.74
RXRBP28702 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RXRBP28702 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.16□□□□□ -1.74
RXRBP28702 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.16□□□□□ -1.74
RXRBP28702 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RXRBP28702 SNORD32A-201ENST00000364805 84 ntBASIC4.16□□□□□ -1.74
RXRBP28702 Y_RNA.343-201ENST00000365354 112 ntBASIC4.16□□□□□ -1.74
RXRBP28702 RNU6-417P-201ENST00000384712 107 ntBASIC4.16□□□□□ -1.74
RXRBP28702 SNORD15B-201ENST00000384714 146 ntBASIC4.16□□□□□ -1.74
RXRBP28702 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RXRBP28702 AL357139.1-201ENST00000407792 426 ntBASIC4.16□□□□□ -1.74
RXRBP28702 AC007919.1-201ENST00000429380 217 ntBASIC4.16□□□□□ -1.74
RXRBP28702 POLR2KP2-201ENST00000438155 177 ntBASIC4.16□□□□□ -1.74
RXRBP28702 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.16□□□□□ -1.74
RXRBP28702 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.16□□□□□ -1.74
RXRBP28702 SNORA31.8-201ENST00000516327 108 ntBASIC4.16□□□□□ -1.74
RXRBP28702 SUMO2P18-201ENST00000518873 252 ntBASIC4.16□□□□□ -1.74
RXRBP28702 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.16□□□□□ -1.74
RXRBP28702 CYCSP39-201ENST00000565821 309 ntBASIC4.16□□□□□ -1.74
RXRBP28702 MIR5047-201ENST00000579212 100 ntBASIC4.16□□□□□ -1.74
RXRBP28702 AL357075.2-201ENST00000614906 189 ntBASIC4.16□□□□□ -1.74
RXRBP28702 AC005296.1-201ENST00000616145 209 ntBASIC4.16□□□□□ -1.74
RXRBP28702 AC027309.3-201ENST00000623419 351 ntBASIC4.16□□□□□ -1.74
RXRBP28702 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RXRBP28702 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RXRBP28702 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RXRBP28702 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
RXRBP28702 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.15□□□□□ -1.74
RXRBP28702 AC073073.2-201ENST00000609827 2578 ntBASIC4.15□□□□□ -1.74
RXRBP28702 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
RXRBP28702 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RXRBP28702 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.15□□□□□ -1.74
RXRBP28702 RNU6-942P-201ENST00000363002 107 ntBASIC4.15□□□□□ -1.75
RXRBP28702 Y_RNA.331-201ENST00000365267 102 ntBASIC4.15□□□□□ -1.75
RXRBP28702 Y_RNA.488-201ENST00000384403 102 ntBASIC4.15□□□□□ -1.75
RXRBP28702 RNU6-658P-201ENST00000384606 106 ntBASIC4.15□□□□□ -1.75
RXRBP28702 RNU6-159P-201ENST00000391080 106 ntBASIC4.15□□□□□ -1.75
RXRBP28702 AL390729.2-201ENST00000416137 156 ntBASIC4.15□□□□□ -1.75
RXRBP28702 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.15□□□□□ -1.75
RXRBP28702 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.15□□□□□ -1.75
RXRBP28702 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.15□□□□□ -1.75
RXRBP28702 AP000873.1-201ENST00000463987 400 ntBASIC4.15□□□□□ -1.75
RXRBP28702 HMGB3P3-201ENST00000510526 400 ntBASIC4.15□□□□□ -1.75
RXRBP28702 AC079600.2-201ENST00000550076 130 ntBASIC4.15□□□□□ -1.75
RXRBP28702 MIR5695-201ENST00000579717 85 ntBASIC4.15□□□□□ -1.75
RXRBP28702 AC024153.1-201ENST00000603103 365 ntBASIC4.15□□□□□ -1.75
RXRBP28702 AC091895.1-201ENST00000624494 256 ntBASIC4.15□□□□□ -1.75
RXRBP28702 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
RXRBP28702 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RXRBP28702 AC006504.1-201ENST00000562493 3666 ntBASIC4.15□□□□□ -1.75
RXRBP28702 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RXRBP28702 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RXRBP28702 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.14□□□□□ -1.75
RXRBP28702 Y_RNA.215-201ENST00000364204 112 ntBASIC4.14□□□□□ -1.75
RXRBP28702 RNU4-56P-201ENST00000364700 142 ntBASIC4.14□□□□□ -1.75
RXRBP28702 RNU6-215P-201ENST00000365169 102 ntBASIC4.14□□□□□ -1.75
RXRBP28702 RNU6-211P-201ENST00000384047 107 ntBASIC4.14□□□□□ -1.75
RXRBP28702 Y_RNA.571-201ENST00000384753 98 ntBASIC4.14□□□□□ -1.75
RXRBP28702 MIR518D-201ENST00000385014 87 ntBASIC4.14□□□□□ -1.75
RXRBP28702 RNU6-257P-201ENST00000410238 98 ntBASIC4.14□□□□□ -1.75
RXRBP28702 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.14□□□□□ -1.75
RXRBP28702 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.14□□□□□ -1.75
RXRBP28702 AC024067.1-201ENST00000426199 223 ntBASIC4.14□□□□□ -1.75
RXRBP28702 RPL23AP95-201ENST00000426806 265 ntBASIC4.14□□□□□ -1.75
RXRBP28702 snoU13.4-201ENST00000458916 104 ntBASIC4.14□□□□□ -1.75
RXRBP28702 AC005921.1-201ENST00000510589 286 ntBASIC4.14□□□□□ -1.75
RXRBP28702 RNU6-426P-201ENST00000516464 97 ntBASIC4.14□□□□□ -1.75
RXRBP28702 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.14□□□□□ -1.75
RXRBP28702 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.14□□□□□ -1.75
RXRBP28702 AC022441.3-201ENST00000605737 136 ntBASIC4.14□□□□□ -1.75
RXRBP28702 snoU18.1-201ENST00000629629 71 ntBASIC4.14□□□□□ -1.75
RXRBP28702 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RXRBP28702 AC100821.1-201ENST00000523153 2479 ntBASIC4.14□□□□□ -1.75
RXRBP28702 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms