Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
VARSP26640 AL355796.1-201ENST00000406706 323 ntBASIC4.34□□□□□ -1.71
VARSP26640 HSPE1P12-201ENST00000412576 301 ntBASIC4.34□□□□□ -1.71
VARSP26640 HMGN2P16-201ENST00000456802 261 ntBASIC4.34□□□□□ -1.71
VARSP26640 snoU13.14-201ENST00000459372 104 ntBASIC4.34□□□□□ -1.71
VARSP26640 RPL23AP62-201ENST00000463396 453 ntBASIC4.34□□□□□ -1.71
VARSP26640 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VARSP26640 RNU6-412P-201ENST00000516434 106 ntBASIC4.34□□□□□ -1.71
VARSP26640 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.34□□□□□ -1.71
VARSP26640 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.34□□□□□ -1.71
VARSP26640 AC069200.1-201ENST00000609511 323 ntBASIC4.34□□□□□ -1.71
VARSP26640 AC073308.1-201ENST00000623696 305 ntBASIC4.34□□□□□ -1.71
VARSP26640 AC011944.2-201ENST00000624440 683 ntBASIC4.34□□□□□ -1.71
VARSP26640 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.34□□□□□ -1.71
VARSP26640 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VARSP26640 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VARSP26640 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VARSP26640 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VARSP26640 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VARSP26640 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VARSP26640 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VARSP26640 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VARSP26640 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VARSP26640 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
VARSP26640 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.33□□□□□ -1.72
VARSP26640 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.33□□□□□ -1.72
VARSP26640 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VARSP26640 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VARSP26640 RNU6-674P-201ENST00000363831 107 ntBASIC4.33□□□□□ -1.72
VARSP26640 RNA5SP509-201ENST00000364577 119 ntBASIC4.33□□□□□ -1.72
VARSP26640 Y_RNA.348-201ENST00000365403 103 ntBASIC4.33□□□□□ -1.72
VARSP26640 MIR1185-2-201ENST00000408687 86 ntBASIC4.33□□□□□ -1.72
VARSP26640 AC012671.1-201ENST00000451912 203 ntBASIC4.33□□□□□ -1.72
VARSP26640 RPL21P10-201ENST00000463521 490 ntBASIC4.33□□□□□ -1.72
VARSP26640 RNU1-61P-201ENST00000516107 151 ntBASIC4.33□□□□□ -1.72
VARSP26640 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.33□□□□□ -1.72
VARSP26640 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VARSP26640 MIR1254-2-201ENST00000579553 63 ntBASIC4.33□□□□□ -1.72
VARSP26640 AL021707.8-201ENST00000609428 183 ntBASIC4.33□□□□□ -1.72
VARSP26640 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
VARSP26640 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
VARSP26640 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.33□□□□□ -1.72
VARSP26640 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.33□□□□□ -1.72
VARSP26640 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.33□□□□□ -1.72
VARSP26640 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
VARSP26640 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VARSP26640 FAM35DP-201ENST00000323387 2712 ntBASIC4.32□□□□□ -1.72
VARSP26640 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VARSP26640 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
VARSP26640 RNU6-1010P-201ENST00000362757 107 ntBASIC4.32□□□□□ -1.72
VARSP26640 RNU6-640P-201ENST00000363693 105 ntBASIC4.32□□□□□ -1.72
VARSP26640 SNORA70C-201ENST00000384538 135 ntBASIC4.32□□□□□ -1.72
VARSP26640 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VARSP26640 RNU2-70P-201ENST00000410718 179 ntBASIC4.32□□□□□ -1.72
VARSP26640 AC011998.1-201ENST00000433403 117 ntBASIC4.32□□□□□ -1.72
VARSP26640 RPS3P1-201ENST00000456781 192 ntBASIC4.32□□□□□ -1.72
VARSP26640 RN7SL303P-201ENST00000469773 251 ntBASIC4.32□□□□□ -1.72
VARSP26640 AC091152.3-201ENST00000604227 325 ntBASIC4.32□□□□□ -1.72
VARSP26640 AL160290.3-201ENST00000604869 165 ntBASIC4.32□□□□□ -1.72
VARSP26640 AL138721.1-201ENST00000616756 179 ntBASIC4.32□□□□□ -1.72
VARSP26640 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VARSP26640 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
VARSP26640 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.31□□□□□ -1.72
VARSP26640 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
VARSP26640 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.31□□□□□ -1.72
VARSP26640 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VARSP26640 RNU6-1107P-201ENST00000364817 104 ntBASIC4.31□□□□□ -1.72
VARSP26640 RNU6-1131P-201ENST00000364955 107 ntBASIC4.31□□□□□ -1.72
VARSP26640 DYNLT3P1-201ENST00000378574 347 ntBASIC4.31□□□□□ -1.72
VARSP26640 RNU6-748P-201ENST00000384648 107 ntBASIC4.31□□□□□ -1.72
VARSP26640 MIR23A-201ENST00000385245 73 ntBASIC4.31□□□□□ -1.72
VARSP26640 SNORD72-201ENST00000390994 80 ntBASIC4.31□□□□□ -1.72
VARSP26640 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.31□□□□□ -1.72
VARSP26640 RPEP3-201ENST00000425462 676 ntBASIC4.31□□□□□ -1.72
VARSP26640 RPL21P129-201ENST00000491732 478 ntBASIC4.31□□□□□ -1.72
VARSP26640 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.31□□□□□ -1.72
VARSP26640 AL022345.2-201ENST00000606307 135 ntBASIC4.31□□□□□ -1.72
VARSP26640 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.31□□□□□ -1.72
VARSP26640 FAM27D1-201ENST00000612308 341 ntBASIC4.31□□□□□ -1.72
VARSP26640 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VARSP26640 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.31□□□□□ -1.72
VARSP26640 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.31□□□□□ -1.72
VARSP26640 AL596211.1-201ENST00000569873 2277 ntBASIC4.3□□□□□ -1.72
VARSP26640 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VARSP26640 AC007656.2-201ENST00000624902 4547 ntBASIC4.3□□□□□ -1.72
VARSP26640 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
VARSP26640 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VARSP26640 AL356292.1-201ENST00000283110 373 ntBASIC4.3□□□□□ -1.72
VARSP26640 Y_RNA.91-201ENST00000363042 107 ntBASIC4.3□□□□□ -1.72
VARSP26640 Y_RNA.281-201ENST00000364774 94 ntBASIC4.3□□□□□ -1.72
VARSP26640 MIR586-201ENST00000385035 97 ntBASIC4.3□□□□□ -1.72
VARSP26640 SNORA12-201ENST00000391162 147 ntBASIC4.3□□□□□ -1.72
VARSP26640 SNORA48.7-201ENST00000391302 135 ntBASIC4.3□□□□□ -1.72
VARSP26640 RPS26P8-201ENST00000393490 348 ntBASIC4.3□□□□□ -1.72
VARSP26640 HMGN2P32-201ENST00000444648 269 ntBASIC4.3□□□□□ -1.72
VARSP26640 HMGN2P7-201ENST00000456186 273 ntBASIC4.3□□□□□ -1.72
VARSP26640 RPL36AP21-201ENST00000490372 323 ntBASIC4.3□□□□□ -1.72
VARSP26640 RN7SL810P-201ENST00000493031 276 ntBASIC4.3□□□□□ -1.72
VARSP26640 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.3□□□□□ -1.72
VARSP26640 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms