Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 SNORA74D-201ENST00000516404 141 ntBASIC3.19□□□□□ -1.9
XPAP23025 AC115990.1-201ENST00000526957 301 ntBASIC3.19□□□□□ -1.9
XPAP23025 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
XPAP23025 MIR4300-201ENST00000581016 96 ntBASIC3.19□□□□□ -1.9
XPAP23025 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.19□□□□□ -1.9
XPAP23025 AC091953.5-201ENST00000622919 233 ntBASIC3.19□□□□□ -1.9
XPAP23025 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.19□□□□□ -1.9
XPAP23025 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
XPAP23025 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
XPAP23025 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
XPAP23025 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
XPAP23025 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.18□□□□□ -1.9
XPAP23025 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.18□□□□□ -1.9
XPAP23025 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
XPAP23025 RNA5SP374-201ENST00000362939 125 ntBASIC3.18□□□□□ -1.9
XPAP23025 RNU6-873P-201ENST00000363833 107 ntBASIC3.18□□□□□ -1.9
XPAP23025 SNORD115-8-201ENST00000363856 82 ntBASIC3.18□□□□□ -1.9
XPAP23025 SNORD115-38-201ENST00000365037 82 ntBASIC3.18□□□□□ -1.9
XPAP23025 Y_RNA.447-201ENST00000384184 113 ntBASIC3.18□□□□□ -1.9
XPAP23025 RNU6-378P-201ENST00000384324 107 ntBASIC3.18□□□□□ -1.9
XPAP23025 SNORD15B-201ENST00000384714 146 ntBASIC3.18□□□□□ -1.9
XPAP23025 MIR186-201ENST00000384988 86 ntBASIC3.18□□□□□ -1.9
XPAP23025 MIR329-1-201ENST00000385028 80 ntBASIC3.18□□□□□ -1.9
XPAP23025 SNORD115-46-201ENST00000390982 71 ntBASIC3.18□□□□□ -1.9
XPAP23025 Z98742.2-201ENST00000431564 187 ntBASIC3.18□□□□□ -1.9
XPAP23025 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.18□□□□□ -1.9
XPAP23025 RNU6-1132P-201ENST00000459214 107 ntBASIC3.18□□□□□ -1.9
XPAP23025 MTND1P19-201ENST00000511780 315 ntBASIC3.18□□□□□ -1.9
XPAP23025 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.18□□□□□ -1.9
XPAP23025 RNU2-53P-201ENST00000516257 147 ntBASIC3.18□□□□□ -1.9
XPAP23025 RNU6-56P-201ENST00000516986 93 ntBASIC3.18□□□□□ -1.9
XPAP23025 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.18□□□□□ -1.9
XPAP23025 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
XPAP23025 AL034555.1-201ENST00000604816 211 ntBASIC3.18□□□□□ -1.9
XPAP23025 MIR376A1-201ENST00000616574 68 ntBASIC3.18□□□□□ -1.9
XPAP23025 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.18□□□□□ -1.9
XPAP23025 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
XPAP23025 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.17□□□□□ -1.9
XPAP23025 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.17□□□□□ -1.9
XPAP23025 ZNF204P-201ENST00000416749 2397 ntBASIC3.17□□□□□ -1.9
XPAP23025 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
XPAP23025 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.17□□□□□ -1.9
XPAP23025 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
XPAP23025 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.17□□□□□ -1.9
XPAP23025 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
XPAP23025 Y_RNA.84-201ENST00000363011 104 ntBASIC3.17□□□□□ -1.9
XPAP23025 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
XPAP23025 AP002088.1-201ENST00000382740 395 ntBASIC3.17□□□□□ -1.9
XPAP23025 RNU6-937P-201ENST00000384325 106 ntBASIC3.17□□□□□ -1.9
XPAP23025 U3.26-201ENST00000391236 204 ntBASIC3.17□□□□□ -1.9
XPAP23025 CBX3P9-201ENST00000402326 552 ntBASIC3.17□□□□□ -1.9
XPAP23025 RPS26P42-201ENST00000413485 326 ntBASIC3.17□□□□□ -1.9
XPAP23025 snoU13.14-201ENST00000459372 104 ntBASIC3.17□□□□□ -1.9
XPAP23025 AC010401.1-201ENST00000463867 348 ntBASIC3.17□□□□□ -1.9
XPAP23025 RPL23AP70-201ENST00000483361 460 ntBASIC3.17□□□□□ -1.9
XPAP23025 RPL36AP48-201ENST00000485521 314 ntBASIC3.17□□□□□ -1.9
XPAP23025 MRPS36P2-201ENST00000512569 299 ntBASIC3.17□□□□□ -1.9
XPAP23025 SCARNA17.1-201ENST00000516211 143 ntBASIC3.17□□□□□ -1.9
XPAP23025 SCARNA17.2-201ENST00000516334 143 ntBASIC3.17□□□□□ -1.9
XPAP23025 RN7SKP49-201ENST00000516675 260 ntBASIC3.17□□□□□ -1.9
XPAP23025 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
XPAP23025 CYP4A27P-201ENST00000567218 190 ntBASIC3.17□□□□□ -1.9
XPAP23025 MIR3136-201ENST00000583498 78 ntBASIC3.17□□□□□ -1.9
XPAP23025 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.17□□□□□ -1.9
XPAP23025 AL138963.2-201ENST00000605137 226 ntBASIC3.17□□□□□ -1.9
XPAP23025 Y_RNA.772-201ENST00000606692 102 ntBASIC3.17□□□□□ -1.9
XPAP23025 SCARNA17.4-201ENST00000614296 143 ntBASIC3.17□□□□□ -1.9
XPAP23025 AL357075.2-201ENST00000614906 189 ntBASIC3.17□□□□□ -1.9
XPAP23025 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
XPAP23025 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
XPAP23025 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
XPAP23025 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.17□□□□□ -1.9
XPAP23025 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
XPAP23025 RNU1-75P-201ENST00000347264 129 ntBASIC3.16□□□□□ -1.9
XPAP23025 MIR422A-201ENST00000362286 90 ntBASIC3.16□□□□□ -1.9
XPAP23025 RNU4-15P-201ENST00000362613 141 ntBASIC3.16□□□□□ -1.9
XPAP23025 RNU6-137P-201ENST00000363680 108 ntBASIC3.16□□□□□ -1.9
XPAP23025 RNU6-525P-201ENST00000363685 104 ntBASIC3.16□□□□□ -1.9
XPAP23025 SNORD56.5-201ENST00000364281 72 ntBASIC3.16□□□□□ -1.9
XPAP23025 RNU6-1145P-201ENST00000384246 107 ntBASIC3.16□□□□□ -1.9
XPAP23025 Y_RNA.476-201ENST00000384347 108 ntBASIC3.16□□□□□ -1.9
XPAP23025 RNU6-1093P-201ENST00000391194 107 ntBASIC3.16□□□□□ -1.9
XPAP23025 MIR208B-201ENST00000401172 77 ntBASIC3.16□□□□□ -1.9
XPAP23025 RNU2-25P-201ENST00000411041 191 ntBASIC3.16□□□□□ -1.9
XPAP23025 RPL32P35-201ENST00000415214 394 ntBASIC3.16□□□□□ -1.9
XPAP23025 AC022018.1-201ENST00000430685 241 ntBASIC3.16□□□□□ -1.9
XPAP23025 AC010095.1-201ENST00000443543 144 ntBASIC3.16□□□□□ -1.9
XPAP23025 TRBVB-201ENST00000477100 408 ntBASIC3.16□□□□□ -1.9
XPAP23025 RNA5SP380-201ENST00000517190 98 ntBASIC3.16□□□□□ -1.9
XPAP23025 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.16□□□□□ -1.9
XPAP23025 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.16□□□□□ -1.9
XPAP23025 MIR3200-201ENST00000580767 85 ntBASIC3.16□□□□□ -1.9
XPAP23025 UBL5P2-201ENST00000583788 219 ntBASIC3.16□□□□□ -1.9
XPAP23025 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.16□□□□□ -1.9
XPAP23025 AL109809.4-201ENST00000603520 2185 ntBASIC3.16□□□□□ -1.9
XPAP23025 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.16□□□□□ -1.9
XPAP23025 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
XPAP23025 AL365361.1-201ENST00000566942 3481 ntBASIC3.15□□□□□ -1.9
XPAP23025 LINC02555-201ENST00000563933 1951 ntBASIC3.15□□□□□ -1.91
XPAP23025 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms