Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 HMGB1P33-201ENST00000563485 527 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AC104581.2-201ENST00000572227 430 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AL357078.3-201ENST00000607528 618 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AC064836.2-201ENST00000609491 462 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AC017083.3-201ENST00000609955 700 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AC009509.4-201ENST00000619202 509 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DPA1P20036 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DPA1P20036 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HLA-DPA1P20036 RNU4-66P-201ENST00000365199 138 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DPA1P20036 USP9YP28-201ENST00000435142 589 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 ATP5J2P3-201ENST00000451550 258 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 snoU13.9-201ENST00000458927 103 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 U8.21-201ENST00000459536 136 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 AC010531.2-201ENST00000465012 153 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DPA1P20036 RNU6-1069P-201ENST00000516612 133 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 RNU6-250P-201ENST00000516958 103 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 AC104576.1-201ENST00000524225 88 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.72□□□□□ -2.13
HLA-DPA1P20036 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DPA1P20036 AC015712.3-201ENST00000559380 164 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 AL158211.1-201ENST00000566763 763 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 MIR4255-201ENST00000579351 72 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 RN7SKP299-201ENST00000606679 301 ntBASIC1.72□□□□□ -2.13
HLA-DPA1P20036 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DPA1P20036 RNU6-414P-201ENST00000363705 104 ntBASIC1.71□□□□□ -2.14
HLA-DPA1P20036 RNU6-296P-201ENST00000384608 107 ntBASIC1.71□□□□□ -2.14
HLA-DPA1P20036 AL663109.1-201ENST00000411498 844 ntBASIC1.71□□□□□ -2.14
HLA-DPA1P20036 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DPA1P20036 CYCSP49-201ENST00000420810 319 ntBASIC1.71□□□□□ -2.14
HLA-DPA1P20036 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DPA1P20036 MTATP6P17-201ENST00000431030 672 ntBASIC1.71□□□□□ -2.14
HLA-DPA1P20036 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.71□□□□□ -2.14
HLA-DPA1P20036 RPS29P27-201ENST00000463711 170 ntBASIC1.71□□□□□ -2.14
HLA-DPA1P20036 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.71□□□□□ -2.14
HLA-DPA1P20036 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DPA1P20036 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.71□□□□□ -2.14
HLA-DPA1P20036 AP005136.1-201ENST00000579765 429 ntBASIC1.71□□□□□ -2.14
HLA-DPA1P20036 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DPA1P20036 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.71□□□□□ -2.14
HLA-DPA1P20036 AP001330.5-201ENST00000607176 411 ntBASIC1.71□□□□□ -2.14
HLA-DPA1P20036 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DPA1P20036 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DPA1P20036 RNU6-545P-201ENST00000362681 104 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 RNU6-562P-201ENST00000362731 107 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 RNU6-862P-201ENST00000362804 105 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 Y_RNA.378-201ENST00000365652 113 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 RNU6-1329P-201ENST00000365664 107 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 RNU6-877P-201ENST00000383868 107 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 RNU6-38P-201ENST00000384085 107 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 DEFB108C-201ENST00000400154 252 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DPA1P20036 AC099677.2-201ENST00000436385 175 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DPA1P20036 SNORA25.15-201ENST00000516487 89 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 SNORD60.2-201ENST00000516883 86 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 AC104383.1-201ENST00000530297 370 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DPA1P20036 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DPA1P20036 AL118558.2-201ENST00000556294 238 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DPA1P20036 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 AL121757.2-201ENST00000611223 313 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 MIR8081-201ENST00000611533 95 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 AC068205.3-201ENST00000636385 468 ntBASIC1.7□□□□□ -2.14
HLA-DPA1P20036 RNU6-1322P-201ENST00000364309 107 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 RNU6-1317P-201ENST00000364582 104 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 Y_RNA.409-201ENST00000383990 98 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 SNORA29-201ENST00000384183 140 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 RNY3P9-201ENST00000384727 106 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 MIR520A-201ENST00000384862 85 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 AL627390.1-201ENST00000396055 340 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 MIR1267-201ENST00000408723 78 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 RNU2-7P-201ENST00000410794 178 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 MTCO1P21-201ENST00000416634 589 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 EBAG9P1-201ENST00000418955 543 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DPA1P20036 UBE2V1P8-201ENST00000437166 265 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DPA1P20036 TPT1P7-201ENST00000458300 517 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 RNU6-261P-201ENST00000459506 102 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 AC083798.1-201ENST00000472671 131 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 AC114801.2-201ENST00000503825 781 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 RNU6-970P-201ENST00000516312 107 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.69□□□□□ -2.14
HLA-DPA1P20036 SNORA59B-202ENST00000578183 701 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 MIR5692C1-201ENST00000585309 91 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 MIR502-201ENST00000606349 86 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.69□□□□□ -2.14
HLA-DPA1P20036 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DPA1P20036 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DPA1P20036 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DPA1P20036 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.68□□□□□ -2.14
HLA-DPA1P20036 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DPA1P20036 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms