Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NKX2-2O95096 RNU1-76P-201ENST00000362903 159 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 RNU6-137P-201ENST00000363680 108 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 RNU6-234P-201ENST00000365229 104 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 DEFA7P-201ENST00000382676 285 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 MIR32-201ENST00000384965 70 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 RNY4P36-201ENST00000391116 96 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 SNORA75.6-201ENST00000391318 127 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 AC007064.1-201ENST00000412238 351 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.28□□□□□ -2.04
NKX2-2O95096 Y_RNA.632-201ENST00000459189 102 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 ANXA2P1-201ENST00000505539 926 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.28□□□□□ -2.04
NKX2-2O95096 RNU7-175P-201ENST00000515915 61 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 Y_RNA.718-201ENST00000517110 102 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.28□□□□□ -2.04
NKX2-2O95096 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.28□□□□□ -2.04
NKX2-2O95096 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.28□□□□□ -2.04
NKX2-2O95096 AC090517.1-201ENST00000569307 266 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.28□□□□□ -2.04
NKX2-2O95096 AC016727.2-201ENST00000603988 621 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 MIR6817-201ENST00000615588 66 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 Z82195.2-201ENST00000612348 18351 ntBASIC2.28□□□□□ -2.04
NKX2-2O95096 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.27□□□□□ -2.05
NKX2-2O95096 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NKX2-2O95096 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NKX2-2O95096 MIR6073-201ENST00000352083 89 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 RNY1P16-201ENST00000363063 111 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 RNU4-73P-201ENST00000363164 141 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 SNORA25.6-201ENST00000364121 118 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 SNORA12.2-201ENST00000391040 156 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 AL359511.1-201ENST00000402970 211 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NKX2-2O95096 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.27□□□□□ -2.05
NKX2-2O95096 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.27□□□□□ -2.05
NKX2-2O95096 ELOCP24-201ENST00000456370 334 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 Y_RNA.653-201ENST00000459091 95 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 AP001486.1-201ENST00000463339 476 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 AC107032.1-201ENST00000485945 480 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.27□□□□□ -2.05
NKX2-2O95096 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.27□□□□□ -2.05
NKX2-2O95096 SNORA4.4-201ENST00000515921 135 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 RNU6-1198P-201ENST00000516904 67 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 DEFB131C-201ENST00000528817 165 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.27□□□□□ -2.05
NKX2-2O95096 SNRPGP17-201ENST00000603780 214 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.27□□□□□ -2.05
NKX2-2O95096 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 AL359697.1-201ENST00000624879 587 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 MTND4LP32-201ENST00000636111 270 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
NKX2-2O95096 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
NKX2-2O95096 BX322639.1-202ENST00000423987 2213 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 AC016717.2-201ENST00000609089 5141 ntBASIC2.27□□□□□ -2.05
NKX2-2O95096 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NKX2-2O95096 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NKX2-2O95096 Y_RNA.259-201ENST00000364619 101 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 Y_RNA.405-201ENST00000383979 100 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 Y_RNA.451-201ENST00000384200 100 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 Y_RNA.524-201ENST00000384564 100 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 Y_RNA.561-201ENST00000384694 100 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 MTCO3P29-201ENST00000432119 779 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX2-2O95096 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX2-2O95096 AL035666.1-201ENST00000446195 348 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 MTCO3P10-201ENST00000455912 772 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.26□□□□□ -2.05
NKX2-2O95096 RNU7-152P-201ENST00000458982 64 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 SNORD19B-201ENST00000459623 84 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 AL049873.1-201ENST00000480540 376 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX2-2O95096 MIR449C-201ENST00000516047 92 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 RNA5SP148-201ENST00000516527 94 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 RNA5SP54-201ENST00000516951 92 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 RNU1-104P-201ENST00000517280 175 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.26□□□□□ -2.05
NKX2-2O95096 AC027288.2-201ENST00000553028 243 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 AC233702.2-202ENST00000562547 291 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 SNORD14A-201ENST00000606526 91 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 AC100812.1-201ENST00000607622 580 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 AC133104.2-201ENST00000615272 193 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 AC005562.2-201ENST00000618264 111 ntBASIC2.26□□□□□ -2.05
NKX2-2O95096 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.26□□□□□ -2.05
NKX2-2O95096 AC007336.1-201ENST00000576365 3828 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
NKX2-2O95096 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NKX2-2O95096 Y_RNA.67-201ENST00000362870 100 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 Y_RNA.319-201ENST00000365138 92 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 RNU6-890P-201ENST00000384121 107 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 MIR487A-201ENST00000385009 80 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 RNU6-1304P-201ENST00000411374 106 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 SRIP3-201ENST00000413200 219 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 EDDM3CP-201ENST00000415977 425 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 MTCO2P27-201ENST00000420740 428 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 MTCYBP10-201ENST00000424905 650 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 AL353997.1-201ENST00000432936 108 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 RPL17P19-201ENST00000489069 552 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 RNU6-1098P-201ENST00000516772 96 ntBASIC2.25□□□□□ -2.05
NKX2-2O95096 RNA5SP137-201ENST00000516833 135 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms