Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-635P-201ENST00000516651 102 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 RNU6-1198P-201ENST00000516904 67 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 RNU6-58P-201ENST00000517143 103 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS4BO75351 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS4BO75351 MIR4435-1-201ENST00000582552 80 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 AC078899.3-201ENST00000599065 212 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 RAC1P9-201ENST00000604990 392 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 AL121655.1-201ENST00000605811 308 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 AC018692.3-201ENST00000623929 123 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 SNORD98-201ENST00000636377 67 ntBASIC2.96□□□□□ -1.94
VPS4BO75351 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS4BO75351 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS4BO75351 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS4BO75351 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS4BO75351 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
VPS4BO75351 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS4BO75351 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.95□□□□□ -1.94
VPS4BO75351 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS4BO75351 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VPS4BO75351 RNU6-222P-201ENST00000362438 107 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 RNU6-1301P-201ENST00000362724 104 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 Y_RNA.210-201ENST00000364161 110 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 Y_RNA.319-201ENST00000365138 92 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 Y_RNA.458-201ENST00000384240 102 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 SNORA7.4-201ENST00000384249 137 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 RNU6-574P-201ENST00000384265 107 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 MIR186-201ENST00000384988 86 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 MIR10B-201ENST00000385011 110 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 SDAD1P3-201ENST00000427380 333 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 USP9YP16-201ENST00000430287 407 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS4BO75351 RPS15AP7-201ENST00000439294 405 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 RPEP5-201ENST00000441137 268 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 AC096638.1-201ENST00000444678 216 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS4BO75351 USP9YP23-201ENST00000455085 407 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS4BO75351 RNU7-87P-201ENST00000459343 62 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 AP004217.1-201ENST00000480579 346 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 AC010469.2-201ENST00000496412 480 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 AC067942.3-201ENST00000512025 362 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 SNORA25.11-201ENST00000515935 105 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS4BO75351 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VPS4BO75351 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS4BO75351 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
VPS4BO75351 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS4BO75351 AC004817.2-201ENST00000561794 651 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 CYP4A27P-201ENST00000567218 190 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS4BO75351 MIR3945-201ENST00000581853 98 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS4BO75351 AC002064.3-201ENST00000623448 346 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.95□□□□□ -1.94
VPS4BO75351 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
VPS4BO75351 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS4BO75351 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS4BO75351 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS4BO75351 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS4BO75351 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS4BO75351 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS4BO75351 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VPS4BO75351 RNU6-1159P-201ENST00000362933 107 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 RNA5SP201-201ENST00000410316 124 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 RNU6-130P-201ENST00000411112 103 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS4BO75351 AC138623.1-201ENST00000418060 216 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 AL139281.1-201ENST00000422120 335 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 ELOCP20-201ENST00000422460 345 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS4BO75351 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS4BO75351 AL121594.1-201ENST00000475906 575 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS4BO75351 RNU6-1012P-201ENST00000516606 109 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 SCARNA11.3-201ENST00000517276 130 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS4BO75351 AC090517.1-201ENST00000569307 266 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 MYL12BP1-201ENST00000569826 507 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS4BO75351 MIR3149-201ENST00000584629 83 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 AL034555.1-201ENST00000604816 211 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 AL138963.2-201ENST00000605137 226 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 AC107871.2-201ENST00000612894 502 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 U4.1-201ENST00000620349 87 ntBASIC2.94□□□□□ -1.94
VPS4BO75351 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS4BO75351 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS4BO75351 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
VPS4BO75351 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS4BO75351 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS4BO75351 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS4BO75351 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
VPS4BO75351 RNA5SP432-201ENST00000362480 116 ntBASIC2.93□□□□□ -1.94
VPS4BO75351 Y_RNA.193-201ENST00000363979 102 ntBASIC2.93□□□□□ -1.94
VPS4BO75351 SNORA71.1-201ENST00000364523 117 ntBASIC2.93□□□□□ -1.94
VPS4BO75351 RNU6-26P-201ENST00000383985 107 ntBASIC2.93□□□□□ -1.94
VPS4BO75351 RNU6-281P-201ENST00000384212 103 ntBASIC2.93□□□□□ -1.94
VPS4BO75351 RNU6-318P-201ENST00000384283 103 ntBASIC2.93□□□□□ -1.94
VPS4BO75351 RNU1-57P-201ENST00000384491 166 ntBASIC2.93□□□□□ -1.94
VPS4BO75351 MIR487A-201ENST00000385009 80 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms