Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 Y_RNA.52-201ENST00000362760 96 ntBASIC4.64□□□□□ -1.67
ACTN4O43707 RNA5SP173-201ENST00000364857 136 ntBASIC4.64□□□□□ -1.67
ACTN4O43707 Y_RNA.528-201ENST00000384575 108 ntBASIC4.64□□□□□ -1.67
ACTN4O43707 AL355796.1-201ENST00000406706 323 ntBASIC4.64□□□□□ -1.67
ACTN4O43707 MIR1185-2-201ENST00000408687 86 ntBASIC4.64□□□□□ -1.67
ACTN4O43707 MTATP6P21-201ENST00000440681 189 ntBASIC4.64□□□□□ -1.67
ACTN4O43707 snoU13.1-201ENST00000459157 104 ntBASIC4.64□□□□□ -1.67
ACTN4O43707 RN7SL459P-201ENST00000481078 302 ntBASIC4.64□□□□□ -1.67
ACTN4O43707 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.64□□□□□ -1.67
ACTN4O43707 RPS15AP11-201ENST00000594193 385 ntBASIC4.64□□□□□ -1.67
ACTN4O43707 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
ACTN4O43707 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.64□□□□□ -1.67
ACTN4O43707 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.64□□□□□ -1.67
ACTN4O43707 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
ACTN4O43707 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ACTN4O43707 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ACTN4O43707 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.64□□□□□ -1.67
ACTN4O43707 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ACTN4O43707 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
ACTN4O43707 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
ACTN4O43707 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
ACTN4O43707 Y_RNA.91-201ENST00000363042 107 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 RNA5SP509-201ENST00000364577 119 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 Y_RNA.634-201ENST00000364811 113 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 SNORA51.10-201ENST00000384418 136 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 SNORA3C-201ENST00000408792 125 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.63□□□□□ -1.67
ACTN4O43707 AC006011.1-201ENST00000442758 349 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 AL021397.1-201ENST00000451806 248 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 snoU13.14-201ENST00000459372 104 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 RPL23AP62-201ENST00000463396 453 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 RPS26P15-201ENST00000488067 348 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 RNU6-970P-201ENST00000516312 107 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 RNU7-143P-201ENST00000516781 65 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 MIR5096-201ENST00000583713 70 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 AC008745.1-201ENST00000604064 271 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 AL356218.2-201ENST00000605264 187 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 MIR6798-201ENST00000612887 67 ntBASIC4.63□□□□□ -1.67
ACTN4O43707 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
ACTN4O43707 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ACTN4O43707 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ACTN4O43707 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ACTN4O43707 RNU6-1010P-201ENST00000362757 107 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 RNU6-271P-201ENST00000363858 105 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 MIR586-201ENST00000385035 97 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ACTN4O43707 AC004552.1-201ENST00000419089 348 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 HMGN2P21-201ENST00000447764 270 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 RPS3P1-201ENST00000456781 192 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 RPS26P3-201ENST00000470205 348 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 RPS26P55-201ENST00000471178 356 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 AC084357.1-201ENST00000473404 255 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 AC090543.2-201ENST00000483963 348 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 AC004057.1-201ENST00000485827 348 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 AC099522.1-202ENST00000514718 367 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 IGKV1-22-201ENST00000524313 326 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 AC011602.1-201ENST00000546484 331 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 AC062037.1-201ENST00000605302 128 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 MIR6820-201ENST00000611508 62 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 RN7SL722P-201ENST00000617780 284 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 RN7SL565P-201ENST00000618246 284 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 MIR1245B-201ENST00000636115 69 ntBASIC4.62□□□□□ -1.67
ACTN4O43707 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTN4O43707 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
ACTN4O43707 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTN4O43707 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ACTN4O43707 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ACTN4O43707 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ACTN4O43707 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ACTN4O43707 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ACTN4O43707 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
ACTN4O43707 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ACTN4O43707 SNORA27.1-201ENST00000362604 124 ntBASIC4.61□□□□□ -1.67
ACTN4O43707 RNA5SP366-201ENST00000365454 123 ntBASIC4.61□□□□□ -1.67
ACTN4O43707 HSPE1P12-201ENST00000412576 301 ntBASIC4.61□□□□□ -1.67
ACTN4O43707 RPL23AP46-201ENST00000438548 490 ntBASIC4.61□□□□□ -1.67
ACTN4O43707 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.61□□□□□ -1.67
ACTN4O43707 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.61□□□□□ -1.67
ACTN4O43707 AC023449.1-201ENST00000454464 154 ntBASIC4.61□□□□□ -1.67
ACTN4O43707 AC010618.1-201ENST00000469924 477 ntBASIC4.61□□□□□ -1.67
ACTN4O43707 RN7SL481P-201ENST00000477764 299 ntBASIC4.61□□□□□ -1.67
ACTN4O43707 AC083906.5-201ENST00000503722 328 ntBASIC4.61□□□□□ -1.67
ACTN4O43707 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
ACTN4O43707 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.61□□□□□ -1.67
ACTN4O43707 TVP23BP1-201ENST00000557500 617 ntBASIC4.61□□□□□ -1.67
ACTN4O43707 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
ACTN4O43707 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTN4O43707 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTN4O43707 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
ACTN4O43707 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.6□□□□□ -1.67
ACTN4O43707 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTN4O43707 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTN4O43707 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
ACTN4O43707 AL356292.1-201ENST00000283110 373 ntBASIC4.6□□□□□ -1.67
ACTN4O43707 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ACTN4O43707 SNORA26-201ENST00000391286 122 ntBASIC4.6□□□□□ -1.67
ACTN4O43707 MIR891A-201ENST00000401237 79 ntBASIC4.6□□□□□ -1.67
ACTN4O43707 RPS3AP1-201ENST00000413190 320 ntBASIC4.6□□□□□ -1.67
ACTN4O43707 RN7SL738P-201ENST00000470264 297 ntBASIC4.6□□□□□ -1.67
ACTN4O43707 AC025647.1-201ENST00000517879 253 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms