Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.98□□□□□ -1.93
PROM1O43490 RNU5B-2P-201ENST00000363036 113 ntBASIC2.98□□□□□ -1.93
PROM1O43490 Y_RNA.319-201ENST00000365138 92 ntBASIC2.98□□□□□ -1.93
PROM1O43490 MIR215-201ENST00000384858 110 ntBASIC2.98□□□□□ -1.93
PROM1O43490 AL079342.1-201ENST00000401460 267 ntBASIC2.98□□□□□ -1.93
PROM1O43490 AL133475.1-201ENST00000404414 305 ntBASIC2.98□□□□□ -1.93
PROM1O43490 RNU2-49P-201ENST00000410666 184 ntBASIC2.98□□□□□ -1.93
PROM1O43490 AL513477.1-202ENST00000417061 214 ntBASIC2.98□□□□□ -1.93
PROM1O43490 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.98□□□□□ -1.93
PROM1O43490 AC244670.1-201ENST00000436879 112 ntBASIC2.98□□□□□ -1.93
PROM1O43490 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.98□□□□□ -1.93
PROM1O43490 AC016700.2-201ENST00000446011 156 ntBASIC2.98□□□□□ -1.93
PROM1O43490 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.98□□□□□ -1.93
PROM1O43490 snoU13.6-201ENST00000458785 104 ntBASIC2.98□□□□□ -1.93
PROM1O43490 RN7SL75P-201ENST00000461926 281 ntBASIC2.98□□□□□ -1.93
PROM1O43490 AP001025.1-201ENST00000486139 332 ntBASIC2.98□□□□□ -1.93
PROM1O43490 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.98□□□□□ -1.93
PROM1O43490 RNU6-1114P-201ENST00000516022 107 ntBASIC2.98□□□□□ -1.93
PROM1O43490 Y_RNA.673-201ENST00000516306 88 ntBASIC2.98□□□□□ -1.93
PROM1O43490 MIR5004-201ENST00000579078 107 ntBASIC2.98□□□□□ -1.93
PROM1O43490 MIR5695-201ENST00000579717 85 ntBASIC2.98□□□□□ -1.93
PROM1O43490 AL442067.1-201ENST00000613261 223 ntBASIC2.98□□□□□ -1.93
PROM1O43490 AC137590.2-201ENST00000619709 240 ntBASIC2.98□□□□□ -1.93
PROM1O43490 AC018692.3-201ENST00000623929 123 ntBASIC2.98□□□□□ -1.93
PROM1O43490 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PROM1O43490 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PROM1O43490 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
PROM1O43490 AC026241.1-201ENST00000517873 2142 ntBASIC2.98□□□□□ -1.93
PROM1O43490 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PROM1O43490 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.97□□□□□ -1.93
PROM1O43490 RNU6-1159P-201ENST00000362933 107 ntBASIC2.97□□□□□ -1.93
PROM1O43490 Y_RNA.84-201ENST00000363011 104 ntBASIC2.97□□□□□ -1.93
PROM1O43490 SNORA7.4-201ENST00000384249 137 ntBASIC2.97□□□□□ -1.93
PROM1O43490 RNU6-19P-201ENST00000384718 107 ntBASIC2.97□□□□□ -1.93
PROM1O43490 MIR487A-201ENST00000385009 80 ntBASIC2.97□□□□□ -1.93
PROM1O43490 RN7SKP61-201ENST00000410642 295 ntBASIC2.97□□□□□ -1.93
PROM1O43490 RNA5SP344-201ENST00000411081 104 ntBASIC2.97□□□□□ -1.93
PROM1O43490 PTGES3P4-201ENST00000426243 356 ntBASIC2.97□□□□□ -1.93
PROM1O43490 AC009414.1-201ENST00000427200 443 ntBASIC2.97□□□□□ -1.93
PROM1O43490 WARS2P1-201ENST00000429678 537 ntBASIC2.97□□□□□ -1.93
PROM1O43490 MTND4LP30-201ENST00000454092 297 ntBASIC2.97□□□□□ -1.93
PROM1O43490 RN7SL863P-201ENST00000462370 296 ntBASIC2.97□□□□□ -1.93
PROM1O43490 RPL27AP5-201ENST00000469428 449 ntBASIC2.97□□□□□ -1.93
PROM1O43490 RNA5SP341-201ENST00000516261 117 ntBASIC2.97□□□□□ -1.93
PROM1O43490 RNU6-1012P-201ENST00000516606 109 ntBASIC2.97□□□□□ -1.93
PROM1O43490 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.97□□□□□ -1.93
PROM1O43490 CKS1BP7-201ENST00000522230 235 ntBASIC2.97□□□□□ -1.93
PROM1O43490 AC016256.1-201ENST00000547971 354 ntBASIC2.97□□□□□ -1.93
PROM1O43490 AC136932.1-201ENST00000574771 208 ntBASIC2.97□□□□□ -1.93
PROM1O43490 MIR4300-201ENST00000581016 96 ntBASIC2.97□□□□□ -1.93
PROM1O43490 AC090897.2-201ENST00000581715 130 ntBASIC2.97□□□□□ -1.93
PROM1O43490 AC005296.1-201ENST00000616145 209 ntBASIC2.97□□□□□ -1.93
PROM1O43490 UCA1.1-201ENST00000620952 75 ntBASIC2.97□□□□□ -1.93
PROM1O43490 MIR622-201ENST00000638396 96 ntBASIC2.97□□□□□ -1.93
PROM1O43490 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PROM1O43490 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.97□□□□□ -1.93
PROM1O43490 HAUS6P2-201ENST00000433254 2404 ntBASIC2.97□□□□□ -1.93
PROM1O43490 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.96□□□□□ -1.93
PROM1O43490 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.96□□□□□ -1.94
PROM1O43490 LINC02555-201ENST00000563933 1951 ntBASIC2.96□□□□□ -1.94
PROM1O43490 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PROM1O43490 AC092268.1-201ENST00000342691 405 ntBASIC2.96□□□□□ -1.94
PROM1O43490 RNA5SP361-201ENST00000362686 118 ntBASIC2.96□□□□□ -1.94
PROM1O43490 SNORA80A-201ENST00000363922 136 ntBASIC2.96□□□□□ -1.94
PROM1O43490 RNU6-937P-201ENST00000384325 106 ntBASIC2.96□□□□□ -1.94
PROM1O43490 RNU6-1093P-201ENST00000391194 107 ntBASIC2.96□□□□□ -1.94
PROM1O43490 RNA5SP390-201ENST00000410191 113 ntBASIC2.96□□□□□ -1.94
PROM1O43490 RNU6-1140P-201ENST00000410517 106 ntBASIC2.96□□□□□ -1.94
PROM1O43490 Y_RNA.602-201ENST00000410535 92 ntBASIC2.96□□□□□ -1.94
PROM1O43490 RNU6-1203P-201ENST00000410703 110 ntBASIC2.96□□□□□ -1.94
PROM1O43490 RNA5SP492-201ENST00000411330 114 ntBASIC2.96□□□□□ -1.94
PROM1O43490 AC023141.4-201ENST00000412031 328 ntBASIC2.96□□□□□ -1.94
PROM1O43490 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.96□□□□□ -1.94
PROM1O43490 EIF1P2-201ENST00000428233 350 ntBASIC2.96□□□□□ -1.94
PROM1O43490 RPS12P18-201ENST00000442381 270 ntBASIC2.96□□□□□ -1.94
PROM1O43490 UQCRHP3-201ENST00000451503 251 ntBASIC2.96□□□□□ -1.94
PROM1O43490 RPL31P41-201ENST00000477967 372 ntBASIC2.96□□□□□ -1.94
PROM1O43490 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.96□□□□□ -1.94
PROM1O43490 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.96□□□□□ -1.94
PROM1O43490 AC021231.3-201ENST00000558497 370 ntBASIC2.96□□□□□ -1.94
PROM1O43490 UBL5P4-201ENST00000562584 236 ntBASIC2.96□□□□□ -1.94
PROM1O43490 MIR5571-201ENST00000577998 113 ntBASIC2.96□□□□□ -1.94
PROM1O43490 AC012433.1-201ENST00000588916 398 ntBASIC2.96□□□□□ -1.94
PROM1O43490 AL138963.2-201ENST00000605137 226 ntBASIC2.96□□□□□ -1.94
PROM1O43490 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.96□□□□□ -1.94
PROM1O43490 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PROM1O43490 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PROM1O43490 SNORD27-201ENST00000363981 72 ntBASIC2.95□□□□□ -1.94
PROM1O43490 RNU6-622P-201ENST00000384272 103 ntBASIC2.95□□□□□ -1.94
PROM1O43490 SNORD15B-201ENST00000384714 146 ntBASIC2.95□□□□□ -1.94
PROM1O43490 SNORD115-46-201ENST00000390982 71 ntBASIC2.95□□□□□ -1.94
PROM1O43490 RNU1-139P-201ENST00000391307 165 ntBASIC2.95□□□□□ -1.94
PROM1O43490 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PROM1O43490 AC138623.1-201ENST00000418060 216 ntBASIC2.95□□□□□ -1.94
PROM1O43490 AL590135.1-201ENST00000422215 156 ntBASIC2.95□□□□□ -1.94
PROM1O43490 AC019205.3-201ENST00000424573 156 ntBASIC2.95□□□□□ -1.94
PROM1O43490 AC078809.1-201ENST00000427601 140 ntBASIC2.95□□□□□ -1.94
PROM1O43490 UBBP3-201ENST00000445497 241 ntBASIC2.95□□□□□ -1.94
PROM1O43490 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.95□□□□□ -1.94
PROM1O43490 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms