Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SHISA3A0PJX4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SHISA3A0PJX4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.34□□□□□ -1.87
SHISA3A0PJX4 RNU1-105P-201ENST00000363470 161 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 RNU6-151P-201ENST00000364158 107 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 Y_RNA.310-201ENST00000365063 113 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 RN7SL303P-201ENST00000469773 251 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 RPS29P2-201ENST00000479278 136 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 AC010409.1-201ENST00000487382 476 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 MIR548X2-201ENST00000579776 100 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 AC091167.4-201ENST00000605079 184 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 AL391903.3-201ENST00000612158 163 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 RNVU1-4-201ENST00000612985 164 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.34□□□□□ -1.87
SHISA3A0PJX4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.34□□□□□ -1.87
SHISA3A0PJX4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
SHISA3A0PJX4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHISA3A0PJX4 AL159152.1-201ENST00000635019 2587 ntBASIC3.34□□□□□ -1.88
SHISA3A0PJX4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHISA3A0PJX4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.34□□□□□ -1.88
SHISA3A0PJX4 AF127577.6-201ENST00000623352 2191 ntBASIC3.34□□□□□ -1.88
SHISA3A0PJX4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHISA3A0PJX4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SHISA3A0PJX4 RNA5SP295-201ENST00000362655 121 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 snoU2_19.4-201ENST00000364329 80 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 SNORD32B-201ENST00000364460 84 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 MIR569-201ENST00000385228 96 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 MIR548B-201ENST00000385247 97 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 MIR199A2-201ENST00000385289 110 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 MIR616-201ENST00000385293 97 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 MIR1183-201ENST00000408856 89 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 YME1L1P1-201ENST00000429435 297 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.33□□□□□ -1.88
SHISA3A0PJX4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.33□□□□□ -1.88
SHISA3A0PJX4 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 RNU6-426P-201ENST00000516464 97 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 RNA5SP179-201ENST00000517284 121 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.33□□□□□ -1.88
SHISA3A0PJX4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.33□□□□□ -1.88
SHISA3A0PJX4 AC025754.2-201ENST00000606491 432 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.33□□□□□ -1.88
SHISA3A0PJX4 MIR6716-201ENST00000613413 80 ntBASIC3.33□□□□□ -1.88
SHISA3A0PJX4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.33□□□□□ -1.88
SHISA3A0PJX4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHISA3A0PJX4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHISA3A0PJX4 MAPK10-373ENST00000641983 6772 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 AC068538.1-201ENST00000376856 336 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 RNU6-144P-201ENST00000383951 107 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 MIR767-201ENST00000390228 109 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 RNU6-1154P-201ENST00000391001 104 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 SNORA48.5-201ENST00000391143 135 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 SNORA12-201ENST00000391162 147 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 AC097463.2-201ENST00000421074 142 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 EIF4EP4-201ENST00000424916 578 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 AC074290.1-201ENST00000448883 135 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 AC090616.3-201ENST00000582184 217 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 DNAJC19P2-201ENST00000593340 302 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 AC099778.2-201ENST00000610904 211 ntBASIC3.32□□□□□ -1.88
SHISA3A0PJX4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHISA3A0PJX4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.31□□□□□ -1.88
SHISA3A0PJX4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHISA3A0PJX4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHISA3A0PJX4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.31□□□□□ -1.88
SHISA3A0PJX4 RNU6-1205P-201ENST00000363625 106 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 RNU6-1048P-201ENST00000364054 107 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 RNU6-1305P-201ENST00000364353 104 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 RNA5SP366-201ENST00000365454 123 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 MIR3074-201ENST00000384885 81 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 MIR1185-2-201ENST00000408687 86 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 HMGN2P31-201ENST00000432430 273 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
SHISA3A0PJX4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.31□□□□□ -1.88
SHISA3A0PJX4 RNU7-141P-201ENST00000459304 62 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 SNRPGP3-201ENST00000469405 227 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 AC109810.1-201ENST00000534066 224 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 MIR4425-201ENST00000580572 84 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 RN7SL600P-201ENST00000581811 299 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHISA3A0PJX4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.31□□□□□ -1.88
SHISA3A0PJX4 AC008739.2-201ENST00000597006 317 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 AC011944.2-201ENST00000624440 683 ntBASIC3.31□□□□□ -1.88
SHISA3A0PJX4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.31□□□□□ -1.88
SHISA3A0PJX4 GABRG2-229ENST00000641017 3628 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms