Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB13Q9Y5F0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHB13Q9Y5F0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB13Q9Y5F0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 AP003122.5-201ENST00000527668 3766 ntBASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 RNU6-832P-201ENST00000363319 107 ntBASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 RNU2-11P-201ENST00000459191 187 ntBASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 SCARNA22-201ENST00000503991 125 ntBASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 AC113410.1-201ENST00000505029 247 ntBASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 MIR3667-201ENST00000581025 74 ntBASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 MIR548Z-201ENST00000584743 97 ntBASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 AC008507.4-201ENST00000585464 127 ntBASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 AC010889.1-201ENST00000566193 2666 ntBASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PCDHB13Q9Y5F0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 RNU1-72P-201ENST00000362976 153 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 Y_RNA.96-201ENST00000363092 109 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 RNU6-418P-201ENST00000384035 107 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 MIR550A3-201ENST00000390735 95 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 AL590762.4-201ENST00000425885 253 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 RPL21P129-201ENST00000491732 478 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 RPS29P21-201ENST00000496272 170 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 AC079598.5-201ENST00000547460 117 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 MIR4737-201ENST00000583979 81 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 RN7SL435P-201ENST00000584418 282 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 AL391358.1-201ENST00000605342 190 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 MIR8069-1-201ENST00000616627 86 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 MIR8069-2-201ENST00000621412 86 ntBASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.24□□□□□ -1.57
PCDHB13Q9Y5F0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 RNA5SP191-201ENST00000362585 102 ntBASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 Y_RNA.410-201ENST00000383992 113 ntBASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 Y_RNA.454-201ENST00000384224 113 ntBASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 MIR577-201ENST00000385196 96 ntBASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 RPL7AP28-201ENST00000464513 571 ntBASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 PPBPP1-201ENST00000510807 373 ntBASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 RN7SKP289-201ENST00000517244 295 ntBASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 MIR4436B2-201ENST00000581415 91 ntBASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 MIR4436B1-201ENST00000583272 91 ntBASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 MIR4438-201ENST00000585271 93 ntBASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 USP8P1-201ENST00000494673 3183 ntBASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 AL136164.3-201ENST00000624429 3978 ntBASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB13Q9Y5F0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 AC006504.1-201ENST00000562493 3666 ntBASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 MAPK10-320ENST00000641462 6696 ntBASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 RNU1-82P-201ENST00000390851 165 ntBASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 AC016909.1-201ENST00000415916 166 ntBASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 AC112771.1-201ENST00000463581 102 ntBASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 HMGN1P7-201ENST00000491722 313 ntBASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 RNU7-70P-201ENST00000516941 66 ntBASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 RNU6-1096P-201ENST00000517089 102 ntBASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 RNU6-1231P-201ENST00000517185 103 ntBASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 MIR4305-201ENST00000583252 102 ntBASIC5.22□□□□□ -1.57
PCDHB13Q9Y5F0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms