Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 RNU6-475P-201ENST00000516073 104 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 AC109329.1-201ENST00000518744 317 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 MIR3149-201ENST00000584629 83 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 AC018889.1-201ENST00000605372 397 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 SNORD58B-201ENST00000607313 66 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 AC090115.4-201ENST00000609970 188 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 AC024581.2-201ENST00000619986 252 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 CTSLP2-204ENST00000629029 392 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 AL606534.2-204ENST00000635008 178 ntBASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.08□□□□□ -1.92
SCAF8Q9UPN6 AC108206.1-201ENST00000570186 4159 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.39-201ENST00000362620 98 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.47-201ENST00000362697 108 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 RNU6-99P-201ENST00000364721 107 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 U8.8-201ENST00000365399 135 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.389-201ENST00000383924 113 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.452-201ENST00000384202 108 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 MIR592-201ENST00000384959 97 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 RPL23AP58-201ENST00000440453 469 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 IFNA11P-201ENST00000446352 526 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 AL353752.1-201ENST00000454946 260 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 RN7SKP43-201ENST00000516173 320 ntBASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.07□□□□□ -1.92
SCAF8Q9UPN6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 RNY1P16-201ENST00000363063 111 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 RNA5SP99-201ENST00000364020 114 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 SNORA68.1-201ENST00000364537 132 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 RNU6-450P-201ENST00000364654 107 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.314-201ENST00000365114 102 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 RNU6-26P-201ENST00000383985 107 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.577-201ENST00000384794 101 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 AL591034.2-201ENST00000402839 359 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 RN7SKP223-201ENST00000410582 62 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 MICF-203ENST00000432679 129 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 U8.20-201ENST00000459445 131 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.721-201ENST00000517207 102 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 SNORA31.23-201ENST00000517219 133 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 AP002770.2-201ENST00000543613 532 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 AC103996.1-201ENST00000555468 102 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 AC010620.2-201ENST00000600135 313 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 AC006006.1-201ENST00000603082 144 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 AC019159.1-201ENST00000605094 187 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 AC002064.3-201ENST00000623448 346 ntBASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.06□□□□□ -1.92
SCAF8Q9UPN6 AL109809.4-201ENST00000603520 2185 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 MIR26A1-201ENST00000362205 77 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.193-201ENST00000363979 102 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 MIR521-1-201ENST00000384902 87 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 RNU6-823P-201ENST00000391042 103 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 RNU6-1156P-201ENST00000410365 100 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 AL591806.2-201ENST00000433122 173 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 UBBP3-201ENST00000445497 241 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 CHEK2P4-201ENST00000450340 246 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 AC112492.4-201ENST00000456549 352 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 U8.21-201ENST00000459536 136 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 RN7SL636P-201ENST00000497504 294 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 AK3P2-201ENST00000507976 429 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 AC004817.2-201ENST00000561794 651 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 7SK.7-201ENST00000603504 247 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 AC138305.3-201ENST00000624988 240 ntBASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
SCAF8Q9UPN6 AC138915.1-201ENST00000565427 1685 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 AL359854.1-201ENST00000614203 1594 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 RNU6-1010P-201ENST00000362757 107 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 RNU6-428P-201ENST00000362942 107 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 VTRNA1-1-201ENST00000363120 99 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.176-201ENST00000363815 109 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.401-201ENST00000383965 117 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 RNU6-622P-201ENST00000384272 103 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 RNU6-505P-201ENST00000384427 107 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.533-201ENST00000384596 114 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 Y_RNA.574-201ENST00000384766 95 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 RNU6-101P-201ENST00000410323 104 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 DPH3P2-201ENST00000422618 250 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 AC004383.1-201ENST00000438135 289 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 RPL39P40-201ENST00000445481 146 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 MRPS36P2-201ENST00000512569 299 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 RNA5SP282-201ENST00000516355 108 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 RNU6-635P-201ENST00000516651 102 ntBASIC3.04□□□□□ -1.92
SCAF8Q9UPN6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms