Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RNU6-948P-201ENST00000516374 107 ntBASIC4.66□□□□□ -1.66
LHX6Q9UPM6 RN7SKP57-201ENST00000517248 293 ntBASIC4.66□□□□□ -1.66
LHX6Q9UPM6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.66□□□□□ -1.66
LHX6Q9UPM6 MIR3124-201ENST00000582636 67 ntBASIC4.66□□□□□ -1.66
LHX6Q9UPM6 MIR4777-201ENST00000583710 86 ntBASIC4.66□□□□□ -1.66
LHX6Q9UPM6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.66□□□□□ -1.66
LHX6Q9UPM6 AC073308.1-201ENST00000623696 305 ntBASIC4.66□□□□□ -1.66
LHX6Q9UPM6 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LHX6Q9UPM6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LHX6Q9UPM6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LHX6Q9UPM6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
LHX6Q9UPM6 Y_RNA.155-201ENST00000363632 101 ntBASIC4.65□□□□□ -1.67
LHX6Q9UPM6 RN7SKP153-201ENST00000365026 316 ntBASIC4.65□□□□□ -1.67
LHX6Q9UPM6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LHX6Q9UPM6 SNORD38C-201ENST00000384381 69 ntBASIC4.65□□□□□ -1.67
LHX6Q9UPM6 SNORA48.4-201ENST00000391089 134 ntBASIC4.65□□□□□ -1.67
LHX6Q9UPM6 RNU6-733P-201ENST00000410759 104 ntBASIC4.65□□□□□ -1.67
LHX6Q9UPM6 RPEP3-201ENST00000425462 676 ntBASIC4.65□□□□□ -1.67
LHX6Q9UPM6 AC010099.1-201ENST00000455434 375 ntBASIC4.65□□□□□ -1.67
LHX6Q9UPM6 RN7SL443P-201ENST00000464331 290 ntBASIC4.65□□□□□ -1.67
LHX6Q9UPM6 HMGN1P7-201ENST00000491722 313 ntBASIC4.65□□□□□ -1.67
LHX6Q9UPM6 MIR3683-201ENST00000580847 82 ntBASIC4.65□□□□□ -1.67
LHX6Q9UPM6 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LHX6Q9UPM6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.65□□□□□ -1.67
LHX6Q9UPM6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LHX6Q9UPM6 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LHX6Q9UPM6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.65□□□□□ -1.67
LHX6Q9UPM6 Z73965.1-201ENST00000623412 2297 ntBASIC4.65□□□□□ -1.67
LHX6Q9UPM6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.65□□□□□ -1.67
LHX6Q9UPM6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.65□□□□□ -1.67
LHX6Q9UPM6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
LHX6Q9UPM6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LHX6Q9UPM6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
LHX6Q9UPM6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LHX6Q9UPM6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LHX6Q9UPM6 RNU6-363P-201ENST00000362895 105 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LHX6Q9UPM6 RNU6-1189P-201ENST00000383958 107 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 MIR147B-201ENST00000390185 80 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 RNU6-887P-201ENST00000410660 100 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 RNU2-49P-201ENST00000410666 184 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 RNU6-628P-201ENST00000410675 107 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 AC023141.4-201ENST00000412031 328 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 RPL32P35-201ENST00000415214 394 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 Y_RNA.705-201ENST00000516862 110 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 RNU6-1231P-201ENST00000517185 103 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 MRPL49P2-201ENST00000521066 465 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.64□□□□□ -1.67
LHX6Q9UPM6 RN7SL703P-201ENST00000578485 302 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 MIR4438-201ENST00000585271 93 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 AP000542.2-201ENST00000623199 6179 ntBASIC4.64□□□□□ -1.67
LHX6Q9UPM6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.64□□□□□ -1.67
LHX6Q9UPM6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LHX6Q9UPM6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LHX6Q9UPM6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LHX6Q9UPM6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.64□□□□□ -1.67
LHX6Q9UPM6 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 SNORD45B-201ENST00000364617 72 ntBASIC4.63□□□□□ -1.67
LHX6Q9UPM6 MIR589-201ENST00000385238 99 ntBASIC4.63□□□□□ -1.67
LHX6Q9UPM6 Y_RNA.607-201ENST00000410597 98 ntBASIC4.63□□□□□ -1.67
LHX6Q9UPM6 Y_RNA.611-201ENST00000410682 108 ntBASIC4.63□□□□□ -1.67
LHX6Q9UPM6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 PRSS3P4-201ENST00000453323 162 ntBASIC4.63□□□□□ -1.67
LHX6Q9UPM6 SNORA59A-201ENST00000459326 152 ntBASIC4.63□□□□□ -1.67
LHX6Q9UPM6 HIGD1AP1-201ENST00000550979 275 ntBASIC4.63□□□□□ -1.67
LHX6Q9UPM6 MIR3618-201ENST00000580330 88 ntBASIC4.63□□□□□ -1.67
LHX6Q9UPM6 AC008739.3-201ENST00000603262 127 ntBASIC4.63□□□□□ -1.67
LHX6Q9UPM6 AC087741.2-201ENST00000619415 172 ntBASIC4.63□□□□□ -1.67
LHX6Q9UPM6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LHX6Q9UPM6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LHX6Q9UPM6 RNU6-409P-201ENST00000384114 104 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 PTMAP2-201ENST00000397627 327 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 RN7SKP156-201ENST00000410308 342 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 AC016831.4-201ENST00000438302 307 ntBASIC4.62□□□□□ -1.67
LHX6Q9UPM6 RPL23AP46-201ENST00000438548 490 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms