Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
DDX41Q9UJV9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.82□□□□□ -1.8
DDX41Q9UJV9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.81□□□□□ -1.8
DDX41Q9UJV9 AC103988.1-201ENST00000566382 2177 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 RNU6-486P-201ENST00000363116 107 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 Y_RNA.222-201ENST00000364264 102 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 RNU6-245P-201ENST00000384020 107 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 RNU6-926P-201ENST00000384075 107 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 MRPL35P1-201ENST00000404272 572 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 RNU6-130P-201ENST00000411112 103 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 LINC01399-202ENST00000458450 244 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.81□□□□□ -1.8
DDX41Q9UJV9 AC006445.1-201ENST00000491925 405 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 SNORA31.6-201ENST00000516241 130 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 SNORA25.14-201ENST00000516481 132 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 CYCSP23-201ENST00000519781 313 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.81□□□□□ -1.8
DDX41Q9UJV9 AC103810.1-201ENST00000579873 453 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 AC062037.2-201ENST00000610137 73 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 AC010999.1-201ENST00000611856 324 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 AC107871.2-201ENST00000612894 502 ntBASIC3.81□□□□□ -1.8
DDX41Q9UJV9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.81□□□□□ -1.8
DDX41Q9UJV9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.81□□□□□ -1.8
DDX41Q9UJV9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
DDX41Q9UJV9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
DDX41Q9UJV9 AC099654.7-201ENST00000635788 2127 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDX41Q9UJV9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX41Q9UJV9 LINC02555-201ENST00000563933 1951 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 AC093908.1-201ENST00000623125 8092 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 RNA5SP197-201ENST00000363357 119 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 U3.9-201ENST00000363823 204 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 RNU6-873P-201ENST00000363833 107 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 MIR128-1-201ENST00000384921 82 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 MT-TG-201ENST00000387429 68 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 Y_RNA.595-201ENST00000410403 105 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 AC096920.1-201ENST00000423991 241 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX41Q9UJV9 RN7SL504P-201ENST00000494496 287 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.8□□□□□ -1.8
DDX41Q9UJV9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX41Q9UJV9 AC245166.1-201ENST00000521012 253 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 AC026470.2-201ENST00000561492 181 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 PCGEM1.1-201ENST00000613431 131 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 MIR376A1-201ENST00000616574 68 ntBASIC3.8□□□□□ -1.8
DDX41Q9UJV9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX41Q9UJV9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDX41Q9UJV9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDX41Q9UJV9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX41Q9UJV9 RNA5SP361-201ENST00000362686 118 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 RNU6-378P-201ENST00000384324 107 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 AL079342.1-201ENST00000401460 267 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 RNU6-1001P-201ENST00000411265 100 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX41Q9UJV9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX41Q9UJV9 AL445305.1-201ENST00000432577 575 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 AL357552.1-201ENST00000445254 415 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.79□□□□□ -1.8
DDX41Q9UJV9 RPL31P41-201ENST00000477967 372 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 Y_RNA.668-201ENST00000516233 93 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 EIF4A1P12-201ENST00000551910 141 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 AC023824.2-201ENST00000566185 400 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX41Q9UJV9 AC008739.2-201ENST00000597006 317 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 AC011476.5-201ENST00000615594 130 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 AC069528.2-201ENST00000624849 1991 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 AC008264.2-201ENST00000610193 3731 ntBASIC3.79□□□□□ -1.8
DDX41Q9UJV9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX41Q9UJV9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDX41Q9UJV9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX41Q9UJV9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
DDX41Q9UJV9 Y_RNA.143-201ENST00000363520 106 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 Y_RNA.179-201ENST00000363844 90 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 RNU6-806P-201ENST00000365147 105 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 Y_RNA.376-201ENST00000365638 108 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 Y_RNA.396-201ENST00000383949 103 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 MIR329-1-201ENST00000385028 80 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 AL512633.1-201ENST00000399931 655 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 AL357075.1-201ENST00000404107 726 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX41Q9UJV9 RPL23AP70-201ENST00000483361 460 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 AC145146.1-201ENST00000496370 254 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX41Q9UJV9 SEM1P1-201ENST00000506694 209 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 AC025465.3-201ENST00000510570 311 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 SCARNA17.1-201ENST00000516211 143 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 SCARNA17.2-201ENST00000516334 143 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 RNU6-1271P-201ENST00000517049 105 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX41Q9UJV9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.78□□□□□ -1.8
DDX41Q9UJV9 MIR5004-201ENST00000579078 107 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 SCARNA17.4-201ENST00000614296 143 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 AC002064.3-201ENST00000623448 346 ntBASIC3.78□□□□□ -1.8
DDX41Q9UJV9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.77□□□□□ -1.81
DDX41Q9UJV9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX41Q9UJV9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.77□□□□□ -1.81
DDX41Q9UJV9 RNU6-1145P-201ENST00000384246 107 ntBASIC3.77□□□□□ -1.81
DDX41Q9UJV9 Y_RNA.476-201ENST00000384347 108 ntBASIC3.77□□□□□ -1.81
DDX41Q9UJV9 RPL21P3-201ENST00000395517 478 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms