Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 MIR5701-2-201ENST00000615634 82 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 BX322639.1-202ENST00000423987 2213 ntBASIC3.05□□□□□ -1.92
DDX56Q9NY93 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
DDX56Q9NY93 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
DDX56Q9NY93 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.05□□□□□ -1.92
DDX56Q9NY93 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
DDX56Q9NY93 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
DDX56Q9NY93 MIR369-201ENST00000362155 70 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 RNU6-280P-201ENST00000364145 104 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 RNU6-245P-201ENST00000384020 107 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 RNU1-148P-201ENST00000384472 162 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 AC007064.1-201ENST00000412238 351 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 AC027124.2-201ENST00000428249 105 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX56Q9NY93 AC107032.1-201ENST00000485945 480 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX56Q9NY93 SNORA4.4-201ENST00000515921 135 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 RNU6-470P-201ENST00000515954 104 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 RNU6-1170P-201ENST00000515974 106 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 AC016727.2-201ENST00000603988 621 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 YPEL5P2-201ENST00000605553 359 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 MIR92B-201ENST00000607575 96 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.04□□□□□ -1.92
DDX56Q9NY93 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
DDX56Q9NY93 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
DDX56Q9NY93 RNU6-743P-201ENST00000364151 106 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 RNU4-76P-201ENST00000364509 141 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 RNU6-1026P-201ENST00000384465 108 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 MIR512-1-201ENST00000384913 84 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 MIR190B-201ENST00000401119 79 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 SRIP3-201ENST00000413200 219 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 EDDM3CP-201ENST00000415977 425 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.03□□□□□ -1.92
DDX56Q9NY93 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 TOMM22P6-201ENST00000465035 409 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.03□□□□□ -1.92
DDX56Q9NY93 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX56Q9NY93 MIR449C-201ENST00000516047 92 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 RNU6-58P-201ENST00000517143 103 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 AC044792.1-201ENST00000593294 196 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 CYP2C61P-201ENST00000604072 290 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 AL080274.1-201ENST00000605565 220 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 AC090971.5-201ENST00000621102 293 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 AC091953.5-201ENST00000622919 233 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 AC096644.4-201ENST00000563417 2912 ntBASIC3.03□□□□□ -1.92
DDX56Q9NY93 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX56Q9NY93 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DDX56Q9NY93 RNU1-76P-201ENST00000362903 159 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 SNORA18.2-201ENST00000383865 132 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 RNU6-1040P-201ENST00000383974 107 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 RNU1-52P-201ENST00000384190 164 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 RNU6-851P-201ENST00000384565 107 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 Y_RNA.577-201ENST00000384794 101 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 MIR592-201ENST00000384959 97 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 MTCO3P29-201ENST00000432119 779 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 AL137159.1-201ENST00000452808 512 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 RNU2-44P-201ENST00000516795 194 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX56Q9NY93 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX56Q9NY93 SUB1P3-201ENST00000564581 315 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 AC004584.2-201ENST00000570407 410 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX56Q9NY93 MIR3944-201ENST00000581277 108 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 MIR1248-201ENST00000629190 106 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 ZNF204P-201ENST00000416749 2397 ntBASIC3.02□□□□□ -1.93
DDX56Q9NY93 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 Y_RNA.138-201ENST00000363462 102 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 RNU6-438P-201ENST00000365561 103 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 MIR559-201ENST00000385188 96 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 MIR524-201ENST00000385242 87 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 SNORA40.19-201ENST00000390846 128 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 SNORD88.1-201ENST00000408684 91 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 RNU2-48P-201ENST00000410694 191 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 HMGN2P35-201ENST00000412164 270 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 MTCO2P12-201ENST00000427426 682 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.01□□□□□ -1.93
DDX56Q9NY93 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX56Q9NY93 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX56Q9NY93 AC007677.1-201ENST00000445757 515 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 RNU7-14P-201ENST00000459331 62 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX56Q9NY93 ANXA2P1-201ENST00000505539 926 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 SLC25A15P5-201ENST00000508033 253 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 RNA5SP490-201ENST00000517141 136 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 AC091144.1-201ENST00000519573 138 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 AP002404.1-201ENST00000532005 451 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 MIR5006-201ENST00000583027 110 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 AL355802.3-201ENST00000607571 545 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.01□□□□□ -1.93
DDX56Q9NY93 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.01□□□□□ -1.93
DDX56Q9NY93 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3□□□□□ -1.93
DDX56Q9NY93 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
DDX56Q9NY93 RNU6-490P-201ENST00000362985 107 ntBASIC3□□□□□ -1.93
DDX56Q9NY93 Y_RNA.197-201ENST00000364004 102 ntBASIC3□□□□□ -1.93
DDX56Q9NY93 SNORD42.2-201ENST00000365570 69 ntBASIC3□□□□□ -1.93
DDX56Q9NY93 MIR625-201ENST00000385047 85 ntBASIC3□□□□□ -1.93
DDX56Q9NY93 RNA5SP171-201ENST00000391071 115 ntBASIC3□□□□□ -1.93
DDX56Q9NY93 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3□□□□□ -1.93
DDX56Q9NY93 AC092423.1-201ENST00000430165 186 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 200.7 ms