Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MIR487A-201ENST00000385009 80 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 SNORD78.2-201ENST00000391076 69 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 U6atac.2-201ENST00000408644 118 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 RN7SKP111-201ENST00000410349 271 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 SDAD1P3-201ENST00000427380 333 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 RPL23AP58-201ENST00000440453 469 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 AC140059.1-201ENST00000489238 361 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 HSPE1P20-201ENST00000538133 289 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 EIF4A1P12-201ENST00000551910 141 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 AC026470.2-201ENST00000561492 181 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 YPEL5P2-201ENST00000605553 359 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 MIR7851-201ENST00000610611 160 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 AC005296.1-201ENST00000616145 209 ntBASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCM2LQ9NUG4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 BX322639.1-202ENST00000423987 2213 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 RNU6-1301P-201ENST00000362724 104 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 RNU6-245P-201ENST00000384020 107 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 RNU6-378P-201ENST00000384324 107 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 SNORA46-201ENST00000384762 135 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 HMGB3P2-201ENST00000411913 584 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 AC112220.1-201ENST00000434628 355 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 AC091179.1-201ENST00000461606 579 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 AC025518.1-201ENST00000479856 347 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 AC131281.1-201ENST00000522984 164 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 COX6CP5-201ENST00000527162 228 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 AC093023.1-201ENST00000547375 507 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 UBL5P4-201ENST00000562584 236 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 AL121655.1-201ENST00000605811 308 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 AC069294.1-201ENST00000608397 350 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 uc_338.1-201ENST00000612113 180 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 AC090517.3-201ENST00000625170 141 ntBASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCM2LQ9NUG4 ZNF204P-201ENST00000416749 2397 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 RNU6-873P-201ENST00000363833 107 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 Y_RNA.471-201ENST00000384312 102 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 RNA5SP213-201ENST00000391031 106 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 WARS2P1-201ENST00000429678 537 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 AC073910.1-201ENST00000445047 438 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 U8.20-201ENST00000459445 131 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 MRPS35P2-201ENST00000508242 191 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 Y_RNA.713-201ENST00000517013 96 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 AC125232.2-201ENST00000592457 143 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 SNRPGP20-201ENST00000604477 205 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 PRR13P7-201ENST00000605538 430 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 U6.92-201ENST00000636464 89 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 AL356274.2-201ENST00000624379 3752 ntBASIC3.1□□□□□ -1.91
CCM2LQ9NUG4 AC080128.1-201ENST00000474389 1917 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 RNU4-35P-201ENST00000362588 141 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 RNA5SP197-201ENST00000363357 119 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 Y_RNA.133-201ENST00000363428 110 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 Y_RNA.149-201ENST00000363558 117 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 Y_RNA.276-201ENST00000364732 109 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 MIR218-1-201ENST00000384999 110 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 UQCRHP3-201ENST00000451503 251 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 AC080013.2-201ENST00000460866 323 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 MTATP8P1-201ENST00000467115 207 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 AC010655.3-201ENST00000478818 450 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 AC110794.1-201ENST00000505816 425 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 EIF4BP1-201ENST00000554881 351 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 MIR7112-201ENST00000616126 65 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 AC008121.3-201ENST00000618726 433 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 AC006386.2-201ENST00000624491 75 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 AC012005.1-201ENST00000624575 75 ntBASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCM2LQ9NUG4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.09□□□□□ -1.92
CCM2LQ9NUG4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCM2LQ9NUG4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms