Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 Y_RNA.665-201ENST00000516177 98 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.72□□□□□ -2.13
NXF3Q9H4D5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.72□□□□□ -2.13
NXF3Q9H4D5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.72□□□□□ -2.13
NXF3Q9H4D5 NDUFA5P6-201ENST00000542110 379 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.72□□□□□ -2.13
NXF3Q9H4D5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.72□□□□□ -2.13
NXF3Q9H4D5 MIR4498-201ENST00000577599 66 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 BNIP3P16-201ENST00000589779 534 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 BNIP3P25-201ENST00000596023 559 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 AC243960.4-201ENST00000600532 288 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 AP003465.2-201ENST00000602571 373 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 SNRPGP17-201ENST00000603780 214 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 AC016727.1-205ENST00000605437 569 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 BX248123.2-201ENST00000606318 124 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 AL121757.2-201ENST00000611223 313 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 RMST_3.1-201ENST00000611651 109 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 AC084782.3-201ENST00000612282 578 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 AL159153.1-201ENST00000619688 317 ntBASIC1.72□□□□□ -2.13
NXF3Q9H4D5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.71□□□□□ -2.14
NXF3Q9H4D5 AC027514.1-201ENST00000588561 1603 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 RNU1-42P-201ENST00000364033 160 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 RNU6-827P-201ENST00000365553 106 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 Y_RNA.453-201ENST00000384223 109 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 MIR186-201ENST00000384988 86 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 SNORD115-47-201ENST00000391226 86 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 Y_RNA.599-201ENST00000410489 109 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 RNU6-293P-201ENST00000411259 106 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 AL158823.1-201ENST00000418441 478 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.71□□□□□ -2.14
NXF3Q9H4D5 AC008267.5-201ENST00000424928 265 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.71□□□□□ -2.14
NXF3Q9H4D5 AC243964.1-201ENST00000441814 261 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.71□□□□□ -2.14
NXF3Q9H4D5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NXF3Q9H4D5 SNORA19.2-201ENST00000516013 114 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 RNU6-718P-201ENST00000516166 105 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 RNU6-586P-201ENST00000517265 104 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 IMMP1LP2-201ENST00000552954 492 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 RPL30P11-203ENST00000598995 310 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 AL031274.2-201ENST00000599419 203 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 AC104458.1-201ENST00000608243 463 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 AC097372.5-201ENST00000623665 376 ntBASIC1.71□□□□□ -2.14
NXF3Q9H4D5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.71□□□□□ -2.14
NXF3Q9H4D5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.71□□□□□ -2.14
NXF3Q9H4D5 Y_RNA.40-201ENST00000362645 93 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 RNU6-877P-201ENST00000383868 107 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 RNU6-1222P-201ENST00000384615 107 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 MIR544A-201ENST00000384855 91 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 RNU6-332P-201ENST00000391193 108 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 RNA5SP118-201ENST00000410385 109 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 Y_RNA.615-201ENST00000410769 117 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 Y_RNA.619-201ENST00000410951 90 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 RNU6-1245P-201ENST00000411130 106 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AP1B1P2-201ENST00000416196 106 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.7□□□□□ -2.14
NXF3Q9H4D5 MRPS10P2-201ENST00000431226 381 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 SNAP23P1-201ENST00000433229 246 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 MTCO2P3-201ENST00000442543 421 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.7□□□□□ -2.14
NXF3Q9H4D5 RPL39P29-201ENST00000447779 157 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AL031274.1-201ENST00000450334 232 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.7□□□□□ -2.14
NXF3Q9H4D5 RPL30P12-201ENST00000474666 353 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AC083904.1-201ENST00000487828 231 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AK3P2-201ENST00000507976 429 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.7□□□□□ -2.14
NXF3Q9H4D5 RNU2-53P-201ENST00000516257 147 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.7□□□□□ -2.14
NXF3Q9H4D5 RNU6-323P-201ENST00000521915 107 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AP005597.4-201ENST00000526762 229 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AP005639.2-201ENST00000527592 928 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AC103996.1-201ENST00000555468 102 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.7□□□□□ -2.14
NXF3Q9H4D5 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 snoU13.31-201ENST00000607291 104 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 AL357078.3-201ENST00000607528 618 ntBASIC1.7□□□□□ -2.14
NXF3Q9H4D5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
NXF3Q9H4D5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NXF3Q9H4D5 RNU6-1210P-201ENST00000363775 107 ntBASIC1.69□□□□□ -2.14
NXF3Q9H4D5 RNU6-60P-201ENST00000364792 103 ntBASIC1.69□□□□□ -2.14
NXF3Q9H4D5 Y_RNA.295-201ENST00000364918 102 ntBASIC1.69□□□□□ -2.14
NXF3Q9H4D5 Y_RNA.373-201ENST00000365600 103 ntBASIC1.69□□□□□ -2.14
NXF3Q9H4D5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NXF3Q9H4D5 RNU6-1106P-201ENST00000390845 107 ntBASIC1.69□□□□□ -2.14
NXF3Q9H4D5 CBX3P9-201ENST00000402326 552 ntBASIC1.69□□□□□ -2.14
NXF3Q9H4D5 MIR1277-201ENST00000408536 78 ntBASIC1.69□□□□□ -2.14
NXF3Q9H4D5 RPL23AP36-201ENST00000413895 458 ntBASIC1.69□□□□□ -2.14
NXF3Q9H4D5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.69□□□□□ -2.14
NXF3Q9H4D5 NDUFA5P4-201ENST00000436704 385 ntBASIC1.69□□□□□ -2.14
NXF3Q9H4D5 AL359672.1-201ENST00000442302 409 ntBASIC1.69□□□□□ -2.14
NXF3Q9H4D5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.69□□□□□ -2.14
NXF3Q9H4D5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.69□□□□□ -2.14
NXF3Q9H4D5 FGF7P6-202ENST00000451282 293 ntBASIC1.69□□□□□ -2.14
NXF3Q9H4D5 AMD1P1-201ENST00000457220 922 ntBASIC1.69□□□□□ -2.14
NXF3Q9H4D5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms