Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SNORD116-13-201ENST00000384408 92 ntBASIC0.08□□□□□ -2.4
CDK5RAP2Q96SN8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.08□□□□□ -2.4
CDK5RAP2Q96SN8 ART2BP-201ENST00000453501 499 ntBASIC0.08□□□□□ -2.4
CDK5RAP2Q96SN8 RNU7-34P-201ENST00000459394 64 ntBASIC0.08□□□□□ -2.4
CDK5RAP2Q96SN8 AC022493.2-201ENST00000506122 481 ntBASIC0.08□□□□□ -2.4
CDK5RAP2Q96SN8 MTCYBP33-201ENST00000575007 1130 ntBASIC0.08□□□□□ -2.4
CDK5RAP2Q96SN8 MIR5708-201ENST00000579723 85 ntBASIC0.08□□□□□ -2.4
CDK5RAP2Q96SN8 MIR4802-201ENST00000581881 80 ntBASIC0.08□□□□□ -2.4
CDK5RAP2Q96SN8 OR4H6P-202ENST00000603819 340 ntBASIC0.08□□□□□ -2.4
CDK5RAP2Q96SN8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.08□□□□□ -2.4
CDK5RAP2Q96SN8 RNU4-48P-201ENST00000365559 182 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 RNU6-331P-201ENST00000384724 107 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 MIR518A1-201ENST00000385068 85 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 MIR1265-201ENST00000408444 86 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 AL022718.1-201ENST00000412004 84 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 Z99497.1-201ENST00000421282 135 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 SNRPEP8-201ENST00000442866 260 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 SEPT14P24-201ENST00000447236 180 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 SRRM1P2-201ENST00000464531 1192 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 AC091135.1-201ENST00000585943 307 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 Z98751.3-201ENST00000604447 521 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 MIR4315-1-201ENST00000636800 73 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 MIR4315-2-201ENST00000640925 73 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 MTND5P33-201ENST00000571250 1450 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 SNORD114-16-201ENST00000363044 70 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 Y_RNA.124-201ENST00000363339 93 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 RNU6-700P-201ENST00000391043 107 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 RPS20P2-201ENST00000402520 389 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 CYCTP-201ENST00000504253 315 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 RNU5F-4P-201ENST00000516581 114 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 AL451064.1-201ENST00000607718 471 ntBASIC0.07□□□□□ -2.4
CDK5RAP2Q96SN8 RNU6-105P-201ENST00000363909 104 ntBASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 SNORA75B-201ENST00000384053 137 ntBASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 RNU6-163P-201ENST00000384396 106 ntBASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 MIR544A-201ENST00000384855 91 ntBASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 AC244098.3-201ENST00000424803 96 ntBASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 AC016925.1-201ENST00000458303 298 ntBASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 AC027338.1-201ENST00000514840 825 ntBASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 Y_RNA.689-201ENST00000516589 107 ntBASIC0.06□□□□□ -2.4
CDK5RAP2Q96SN8 AF228730.1-201ENST00000397972 663 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AC022364.2-201ENST00000457963 554 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 RNU6-947P-201ENST00000516264 106 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AC115990.1-201ENST00000526957 301 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AC017083.3-201ENST00000609955 700 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AC124016.2-201ENST00000610058 665 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AC116165.2-201ENST00000616705 206 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 7SK.10-201ENST00000621414 298 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 SNORD31B-201ENST00000364977 69 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 SNORA12.2-201ENST00000391040 156 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AC068533.2-201ENST00000411872 306 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 MTCO2P1-201ENST00000424648 477 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AC006026.2-201ENST00000457376 180 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AC010531.2-201ENST00000465012 153 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 RPS23P5-201ENST00000495419 428 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 HMGB1P28-201ENST00000507778 552 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AC011406.1-201ENST00000512440 370 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 AL158032.1-201ENST00000605401 106 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.05□□□□□ -2.4
CDK5RAP2Q96SN8 RNU4-15P-201ENST00000362613 141 ntBASIC0.04□□□□□ -2.4
CDK5RAP2Q96SN8 FCF1P10-201ENST00000407590 479 ntBASIC0.04□□□□□ -2.4
CDK5RAP2Q96SN8 RNU6-1245P-201ENST00000411130 106 ntBASIC0.04□□□□□ -2.4
CDK5RAP2Q96SN8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.04□□□□□ -2.4
CDK5RAP2Q96SN8 AP000797.1-201ENST00000478870 387 ntBASIC0.04□□□□□ -2.4
CDK5RAP2Q96SN8 HMGN1P12-201ENST00000499125 195 ntBASIC0.04□□□□□ -2.4
CDK5RAP2Q96SN8 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.04□□□□□ -2.4
CDK5RAP2Q96SN8 Y_RNA.687-201ENST00000516558 91 ntBASIC0.04□□□□□ -2.4
CDK5RAP2Q96SN8 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.04□□□□□ -2.4
CDK5RAP2Q96SN8 SNORD56.1-201ENST00000362913 68 ntBASIC0.03□□□□□ -2.4
CDK5RAP2Q96SN8 AL079342.2-201ENST00000403367 482 ntBASIC0.03□□□□□ -2.4
CDK5RAP2Q96SN8 RNA5SP504-201ENST00000410676 117 ntBASIC0.03□□□□□ -2.4
CDK5RAP2Q96SN8 AL122001.1-201ENST00000457027 370 ntBASIC0.03□□□□□ -2.4
CDK5RAP2Q96SN8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.03□□□□□ -2.4
CDK5RAP2Q96SN8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.03□□□□□ -2.4
CDK5RAP2Q96SN8 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.03□□□□□ -2.4
CDK5RAP2Q96SN8 AC090888.2-201ENST00000559765 1144 ntBASIC0.03□□□□□ -2.4
CDK5RAP2Q96SN8 AC087588.2-201ENST00000617667 426 ntBASIC0.03□□□□□ -2.4
CDK5RAP2Q96SN8 SNORA4.2-201ENST00000365313 147 ntBASIC0.03□□□□□ -2.41
CDK5RAP2Q96SN8 MIR653-201ENST00000385279 96 ntBASIC0.03□□□□□ -2.41
CDK5RAP2Q96SN8 UBE2V1P15-201ENST00000407776 448 ntBASIC0.03□□□□□ -2.41
CDK5RAP2Q96SN8 RPL37P21-201ENST00000435890 276 ntBASIC0.03□□□□□ -2.41
CDK5RAP2Q96SN8 RNU7-21P-201ENST00000459430 62 ntBASIC0.03□□□□□ -2.41
CDK5RAP2Q96SN8 SCARNA1-201ENST00000517138 166 ntBASIC0.03□□□□□ -2.41
CDK5RAP2Q96SN8 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms