Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNU6-760P-201ENST00000516078 97 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNU7-51P-201ENST00000516560 62 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SNRPGP18-201ENST00000553000 214 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC103968.1-201ENST00000557841 573 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 U8.2-201ENST00000363156 134 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SNORD115-27-201ENST00000364430 82 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SNORD115.2-201ENST00000391126 59 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MIR513C-201ENST00000401352 84 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.595-201ENST00000410403 105 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 RNU4-64P-201ENST00000410795 131 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 HMGB1P37-201ENST00000439613 609 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC006445.1-201ENST00000491925 405 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 BTF3L4P4-201ENST00000506381 449 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 SCARNA1-201ENST00000517138 166 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC136619.2-201ENST00000563361 631 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MIR4273-201ENST00000582824 84 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 AC002984.1-201ENST00000591692 448 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 MIR8054-201ENST00000620877 86 ntBASIC1.12□□□□□ -2.23
HMCN1Q96RW7 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMCN1Q96RW7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 RNU6-968P-201ENST00000384076 107 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 MIR199A2-201ENST00000385289 110 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 U6atac.2-201ENST00000408644 118 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 RPS4XP2-201ENST00000458402 793 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AC023194.1-201ENST00000493084 308 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 SNORA31.6-201ENST00000516241 130 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 RFPL1S-203ENST00000539579 330 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.93-201ENST00000363066 109 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 RNU6-621P-201ENST00000364752 109 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 RNU6-43P-201ENST00000384302 107 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.622-201ENST00000411091 108 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 RPL36AP6-201ENST00000435770 321 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AL353705.4-201ENST00000449661 238 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 RPL21P47-201ENST00000483696 477 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AC002350.1-201ENST00000490759 375 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 SNORA25.13-201ENST00000516395 103 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AC068657.1-201ENST00000520807 306 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 SNRPGP16-201ENST00000533275 226 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AL391261.3-201ENST00000557194 520 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 HMGB3P26-201ENST00000560051 582 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 SNORD53-201ENST00000579969 78 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AL356280.1-201ENST00000603614 379 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 OR4H6P-202ENST00000603819 340 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AC005618.4-201ENST00000625053 554 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 RNU6-859P-201ENST00000362728 107 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.298-201ENST00000364960 107 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.544-201ENST00000384650 113 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 MIR570-201ENST00000384917 97 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AL136372.1-201ENST00000403060 228 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.594-201ENST00000410373 140 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 RPS15AP5-201ENST00000436276 388 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AC093852.1-201ENST00000503587 266 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 AP002404.1-201ENST00000532005 451 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 MIR7853-201ENST00000584820 132 ntBASIC1.11□□□□□ -2.23
HMCN1Q96RW7 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC1.11□□□□□ -2.23
HMCN1Q96RW7 RNU6-490P-201ENST00000362985 107 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms