Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC090115.3-201ENST00000553218 849 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AC027807.1-201ENST00000559921 996 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AC136932.1-201ENST00000574771 208 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 SNORD53B-201ENST00000577887 78 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AC011494.1-201ENST00000596454 237 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AC078795.3-201ENST00000602913 472 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 AC022513.1-201ENST00000624512 117 ntBASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.39□□□□□ -2.19
PKNOX2Q96KN3 MIR340-201ENST00000362125 95 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 U3.9-201ENST00000363823 204 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 MTCO3P41-201ENST00000414801 328 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 MTATP6P18-201ENST00000417994 673 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AL358934.1-201ENST00000432346 324 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 UBE2V1P8-201ENST00000437166 265 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 RPS29P28-201ENST00000446439 141 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 snoU13.15-201ENST00000459407 104 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 ATP5EP1-201ENST00000510257 156 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 MTCO2P4-201ENST00000517968 247 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AL391840.1-201ENST00000571144 367 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AC040904.1-201ENST00000590850 223 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AL391646.1-201ENST00000603860 190 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AC008536.2-201ENST00000607284 349 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AC136475.10-201ENST00000620253 385 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 AL450472.1-202ENST00000637286 180 ntBASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
PKNOX2Q96KN3 MTND4P14-201ENST00000435799 1354 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 RNU6-552P-201ENST00000362869 119 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 RNU6-203P-201ENST00000384038 104 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 RNU6-517P-201ENST00000384362 110 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 SNORA26.9-201ENST00000391322 122 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 MIR1261-201ENST00000408659 82 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 EIF1P1-201ENST00000421436 341 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 MTATP6P3-201ENST00000581686 676 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 AL158827.2-201ENST00000602494 330 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 AP001836.1-201ENST00000604675 523 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 MIR8063-201ENST00000621930 81 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 AC120349.3-201ENST00000624377 529 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 AL691447.3-201ENST00000635020 330 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 AC099654.5-201ENST00000636479 350 ntBASIC1.37□□□□□ -2.19
PKNOX2Q96KN3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 Y_RNA.159-201ENST00000363674 87 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 RNU1-124P-201ENST00000363861 145 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 RNU6-968P-201ENST00000384076 107 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 RN7SKP142-201ENST00000411236 328 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 AC092447.3-201ENST00000426027 686 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 SNRPEP8-201ENST00000442866 260 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 RPS29P29-201ENST00000456396 171 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 AC007547.1-201ENST00000462177 490 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 AC008628.2-201ENST00000502605 298 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 AC116337.1-201ENST00000509680 687 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 AC091874.1-201ENST00000511402 339 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 RNU6-567P-201ENST00000516746 107 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 AL161670.1-201ENST00000554348 137 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 AC021231.3-201ENST00000558497 370 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 AL645939.4-201ENST00000604495 135 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 U2.17-201ENST00000611454 95 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 MIR8065-201ENST00000620577 100 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 AC005609.4-201ENST00000625071 447 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 ZNF72P-201ENST00000425869 1908 ntBASIC1.36□□□□□ -2.19
PKNOX2Q96KN3 RNU6-438P-201ENST00000365561 103 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 SNORA32.2-201ENST00000384049 122 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 RNU6-378P-201ENST00000384324 107 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 RNU6-348P-201ENST00000384386 107 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 RNU6-360P-201ENST00000390944 104 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 CETN4P-201ENST00000432407 469 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 AC002486.1-201ENST00000435098 391 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 RPS27AP8-201ENST00000452665 445 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 RPL31P3-201ENST00000458430 332 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 RPL26P26-201ENST00000480251 434 ntBASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
PKNOX2Q96KN3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms