Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.43□□□□□ -2.18
USP47Q96K76 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.43□□□□□ -2.18
USP47Q96K76 SNORD42A-201ENST00000459584 64 ntBASIC1.43□□□□□ -2.18
USP47Q96K76 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.43□□□□□ -2.18
USP47Q96K76 SNORA18.6-201ENST00000516792 115 ntBASIC1.43□□□□□ -2.18
USP47Q96K76 SNORA31.17-201ENST00000516953 127 ntBASIC1.43□□□□□ -2.18
USP47Q96K76 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.43□□□□□ -2.18
USP47Q96K76 SUB1P4-201ENST00000566062 339 ntBASIC1.43□□□□□ -2.18
USP47Q96K76 AC245014.2-201ENST00000603689 287 ntBASIC1.43□□□□□ -2.18
USP47Q96K76 AC064872.1-201ENST00000604823 1072 ntBASIC1.43□□□□□ -2.18
USP47Q96K76 AC246785.4-201ENST00000605374 287 ntBASIC1.43□□□□□ -2.18
USP47Q96K76 AC006566.1-201ENST00000608943 513 ntBASIC1.43□□□□□ -2.18
USP47Q96K76 AL360219.1-201ENST00000610230 366 ntBASIC1.43□□□□□ -2.18
USP47Q96K76 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.42□□□□□ -2.18
USP47Q96K76 RNU4-21P-201ENST00000362802 126 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 U3.4-201ENST00000363352 213 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 RNU6-282P-201ENST00000365357 103 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 RNU4-48P-201ENST00000365559 182 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 RNU5A-2P-201ENST00000384337 116 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 RNU6-434P-201ENST00000384376 107 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 RNU6-456P-201ENST00000384493 107 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 MT-TH-201ENST00000387441 69 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
USP47Q96K76 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 RNU4-46P-201ENST00000410818 138 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 RNU2-41P-201ENST00000410991 178 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 MTCO3P41-201ENST00000414801 328 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.42□□□□□ -2.18
USP47Q96K76 AC123900.1-201ENST00000420390 96 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 AL365203.2-201ENST00000423444 196 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 SNRPEP8-201ENST00000442866 260 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 HSPE1P24-201ENST00000450782 238 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 AC021146.2-201ENST00000504736 556 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.42□□□□□ -2.18
USP47Q96K76 AC005741.1-201ENST00000511094 432 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 RNA5SP436-201ENST00000516020 115 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 RNU6-970P-201ENST00000516312 107 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.42□□□□□ -2.18
USP47Q96K76 HSPE1P4-201ENST00000550617 308 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 AL160236.1-201ENST00000556317 195 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.42□□□□□ -2.18
USP47Q96K76 AC022418.1-201ENST00000624118 445 ntBASIC1.42□□□□□ -2.18
USP47Q96K76 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.42□□□□□ -2.18
USP47Q96K76 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
USP47Q96K76 Y_RNA.205-201ENST00000364128 113 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 RNU4-56P-201ENST00000364700 142 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.41□□□□□ -2.18
USP47Q96K76 MTND2P18-201ENST00000419962 1030 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.41□□□□□ -2.18
USP47Q96K76 AC078809.1-201ENST00000427601 140 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 AC013470.1-201ENST00000453438 462 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 MTCO2P6-201ENST00000463134 685 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.41□□□□□ -2.18
USP47Q96K76 RNU2-69P-201ENST00000516061 100 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.41□□□□□ -2.18
USP47Q96K76 AC103996.1-201ENST00000555468 102 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.41□□□□□ -2.18
USP47Q96K76 MIR4703-201ENST00000577728 79 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 MIR3923-201ENST00000579521 83 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.41□□□□□ -2.18
USP47Q96K76 AC005786.1-201ENST00000588553 154 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 AC011712.1-201ENST00000588959 234 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 MIR8074-201ENST00000615081 81 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
USP47Q96K76 uc_338.11-201ENST00000619132 160 ntBASIC1.41□□□□□ -2.18
USP47Q96K76 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
USP47Q96K76 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
USP47Q96K76 SNORD32A-201ENST00000364805 84 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 RNU6-438P-201ENST00000365561 103 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 Y_RNA.480-201ENST00000384364 102 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 RNY3P10-201ENST00000384764 102 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 RPS29P13-201ENST00000402041 169 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 MTCYBP2-201ENST00000407745 171 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.4□□□□□ -2.19
USP47Q96K76 AL031274.1-201ENST00000450334 232 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 AC007395.1-201ENST00000451333 677 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 RNU1-131P-201ENST00000458943 161 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 AC005908.1-201ENST00000468701 347 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 AC027575.1-201ENST00000481064 460 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 AC079382.1-201ENST00000493346 557 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.4□□□□□ -2.19
USP47Q96K76 AK3P2-201ENST00000507976 429 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.4□□□□□ -2.19
USP47Q96K76 AC060788.1-201ENST00000521318 469 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 MIR5094-201ENST00000578766 85 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 AC012507.3-201ENST00000603556 477 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 AC211469.2-201ENST00000605461 205 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 AC002044.1-201ENST00000606707 158 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 AC022513.1-201ENST00000624512 117 ntBASIC1.4□□□□□ -2.19
USP47Q96K76 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.4□□□□□ -2.19
USP47Q96K76 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.39□□□□□ -2.19
USP47Q96K76 RNU6-181P-201ENST00000363225 107 ntBASIC1.39□□□□□ -2.19
USP47Q96K76 RNU6-827P-201ENST00000365553 106 ntBASIC1.39□□□□□ -2.19
USP47Q96K76 Y_RNA.374-201ENST00000365606 101 ntBASIC1.39□□□□□ -2.19
USP47Q96K76 RNU6-338P-201ENST00000383888 105 ntBASIC1.39□□□□□ -2.19
USP47Q96K76 RNU6-1127P-201ENST00000384580 107 ntBASIC1.39□□□□□ -2.19
USP47Q96K76 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
USP47Q96K76 SNORA16.2-201ENST00000390991 127 ntBASIC1.39□□□□□ -2.19
USP47Q96K76 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 659.4 ms