Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 MIR3145-201ENST00000580727 82 ntBASIC3.17□□□□□ -1.9
NEIL1Q96FI4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.17□□□□□ -1.9
NEIL1Q96FI4 UCA1.1-201ENST00000620952 75 ntBASIC3.17□□□□□ -1.9
NEIL1Q96FI4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEIL1Q96FI4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NEIL1Q96FI4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.17□□□□□ -1.9
NEIL1Q96FI4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEIL1Q96FI4 GABRG2-229ENST00000641017 3628 ntBASIC3.17□□□□□ -1.9
NEIL1Q96FI4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 Y_RNA.8-201ENST00000362353 102 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 RNU6-704P-201ENST00000364162 103 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 Y_RNA.304-201ENST00000365011 112 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 RNU6-793P-201ENST00000384233 104 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 Y_RNA.498-201ENST00000384460 102 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 MIR613-201ENST00000385248 95 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 RNU6-750P-201ENST00000390946 107 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 RNU6-1199P-201ENST00000411249 104 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 AC023141.4-201ENST00000412031 328 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 ELOCP21-201ENST00000412558 336 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 AL161651.1-201ENST00000440882 223 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 RNU6-191P-201ENST00000516295 94 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 AP005660.1-201ENST00000522972 293 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 MIR1254-2-201ENST00000579553 63 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 AC004832.4-201ENST00000608952 331 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 AC091932.3-201ENST00000624223 323 ntBASIC3.16□□□□□ -1.9
NEIL1Q96FI4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEIL1Q96FI4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NEIL1Q96FI4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
NEIL1Q96FI4 Y_RNA.262-201ENST00000364641 102 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 Y_RNA.398-201ENST00000383952 99 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 PTMAP2-201ENST00000397627 327 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 EI24P2-201ENST00000397776 1076 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 AL512633.1-201ENST00000399931 655 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 RNU6-1135P-201ENST00000411083 103 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 AC024067.1-201ENST00000426199 223 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 AL133547.1-201ENST00000448546 220 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 AL441985.1-201ENST00000457727 251 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 SNORA84-201ENST00000459229 133 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 AL133162.1-201ENST00000463228 453 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 AL121594.1-201ENST00000475906 575 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.15□□□□□ -1.91
NEIL1Q96FI4 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 SCARNA14-201ENST00000516903 136 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.15□□□□□ -1.91
NEIL1Q96FI4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.15□□□□□ -1.91
NEIL1Q96FI4 MIR5187-201ENST00000583479 76 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.15□□□□□ -1.91
NEIL1Q96FI4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.15□□□□□ -1.91
NEIL1Q96FI4 AC004467.1-201ENST00000615678 330 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 snoU18.1-201ENST00000629629 71 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 SNORD98-201ENST00000636377 67 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.15□□□□□ -1.91
NEIL1Q96FI4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NEIL1Q96FI4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.15□□□□□ -1.91
NEIL1Q96FI4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
NEIL1Q96FI4 AC010889.1-201ENST00000566193 2666 ntBASIC3.15□□□□□ -1.91
NEIL1Q96FI4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.15□□□□□ -1.91
NEIL1Q96FI4 AC002543.1-201ENST00000299783 1954 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 AC092593.1-201ENST00000515413 1815 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
NEIL1Q96FI4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NEIL1Q96FI4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
NEIL1Q96FI4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
NEIL1Q96FI4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NEIL1Q96FI4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.14□□□□□ -1.91
NEIL1Q96FI4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NEIL1Q96FI4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
NEIL1Q96FI4 RNU4-56P-201ENST00000364700 142 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 RNU6-245P-201ENST00000384020 107 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 RNU6-211P-201ENST00000384047 107 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 MIR200C-201ENST00000384980 68 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NEIL1Q96FI4 U3.39-201ENST00000408569 239 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 MTATP6P29-201ENST00000415057 132 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 AC009414.1-201ENST00000427200 443 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 AL358232.1-201ENST00000448030 501 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.14□□□□□ -1.91
NEIL1Q96FI4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.14□□□□□ -1.91
NEIL1Q96FI4 RNU6-155P-201ENST00000516347 100 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 RN7SKP209-201ENST00000516888 304 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 AC115990.1-201ENST00000526957 301 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 AP002001.1-203ENST00000534002 267 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 AC090877.1-201ENST00000561418 344 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 CYP4A27P-201ENST00000567218 190 ntBASIC3.14□□□□□ -1.91
NEIL1Q96FI4 AL137849.1-201ENST00000604767 169 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms